ENSG00000140839


Homo sapiens

Features
Gene ID: ENSG00000140839
  
Biological name :CLEC18B
  
Synonyms : CLEC18B / C-type lectin domain family 18 member B / Q6UXF7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q23.1
Gene start: 74408270
Gene end: 74421953
  
Corresponding Affymetrix probe sets: 230022_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000341051
Ensembl peptide - ENSP00000483587
Ensembl peptide - ENSP00000482974
Ensembl peptide - ENSP00000477577
NCBI entrez gene - 497190     See in Manteia.
OMIM - 616572
RefSeq - XM_017023255
RefSeq - XM_017023256
RefSeq - XM_011523093
RefSeq - NM_001011880
RefSeq - XM_005255976
RefSeq Peptide - NP_001011880
swissprot - Q6UXF7
swissprot - A0A087WT46
swissprot - A0A087X0Q5
Ensembl - ENSG00000140839
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000027183Gallus gallus
 Q7TSQ1ENSMUSG00000033633Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8NCF0 / CLEC18C / C-type lectin domain family 18 member CENSG0000015733597
A5D8T8 / CLEC18A / C-type lectin domain family 18 member AENSG0000015732297


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001283  Cysteine-rich secretory protein, allergen V5/Tpx-1-related
 IPR001304  C-type lectin-like
 IPR013032  EGF-like, conserved site
 IPR014044  CAP domain
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site
 IPR035940  CAP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005768 endosome TAS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus TAS
 cellular_componentGO:0016529 sarcoplasmic reticulum TAS
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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