ENSG00000157322


Homo sapiens

Features
Gene ID: ENSG00000157322
  
Biological name :CLEC18A
  
Synonyms : A5D8T8 / CLEC18A / C-type lectin domain family 18 member A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q22.1
Gene start: 69950705
Gene end: 69964452
  
Corresponding Affymetrix probe sets: 230022_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000454976
Ensembl peptide - ENSP00000454685
Ensembl peptide - ENSP00000484176
Ensembl peptide - ENSP00000288040
Ensembl peptide - ENSP00000377304
Ensembl peptide - ENSP00000413990
NCBI entrez gene - 348174     See in Manteia.
OMIM - 616571
RefSeq - XM_017023209
RefSeq - NM_001271197
RefSeq - NM_182619
RefSeq - XM_005255934
RefSeq - XM_017023206
RefSeq - XM_017023207
RefSeq - XM_017023208
RefSeq - NM_001136214
RefSeq Peptide - NP_001258126
RefSeq Peptide - NP_872425
RefSeq Peptide - NP_001129686
swissprot - F8W692
swissprot - H3BNR9
swissprot - A5D8T8
Ensembl - ENSG00000157322
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000027183Gallus gallus
 Q7TSQ1ENSMUSG00000033633Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8NCF0 / CLEC18C / C-type lectin domain family 18 member CENSG0000015733599
Q6UXF7 / CLEC18B / C-type lectin domain family 18 member BENSG0000014083999


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001283  Cysteine-rich secretory protein, allergen V5/Tpx-1-related
 IPR001304  C-type lectin-like
 IPR013032  EGF-like, conserved site
 IPR014044  CAP domain
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site
 IPR035940  CAP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005768 endosome TAS
 cellular_componentGO:0005783 endoplasmic reticulum TAS
 cellular_componentGO:0005794 Golgi apparatus TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:0030247 polysaccharide binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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