ENSMUSG00000033633


Mus musculus

Features
Gene ID: ENSMUSG00000033633
  
Biological name :Clec18a
  
Synonyms : Clec18a / C-type lectin domain family 18 member A / Q7TSQ1
  
Possible biological names infered from orthology : A5D8T8 / CLEC18B / CLEC18C / C-type lectin domain family 18 member B / C-type lectin domain family 18 member C / Q6UXF7 / Q8NCF0
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: E1
Gene start: 111058920
Gene end: 111092426
  
Corresponding Affymetrix probe sets: 10581750 (MoGene1.0st)   1436474_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000139634
Ensembl peptide - ENSMUSP00000141073
Ensembl peptide - ENSMUSP00000140703
Ensembl peptide - ENSMUSP00000139789
Ensembl peptide - ENSMUSP00000046546
Ensembl peptide - ENSMUSP00000139515
Ensembl peptide - ENSMUSP00000139569
NCBI entrez gene - 353287     See in Manteia.
MGI - MGI:2672935
RefSeq - XM_006531143
RefSeq - XM_011248419
RefSeq - XM_011248418
RefSeq - NM_181549
RefSeq Peptide - NP_853527
swissprot - Q7TSQ1
swissprot - A0A087WRN2
swissprot - A0A087WP55
swissprot - A0A087WPI3
Ensembl - ENSMUSG00000033633
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000027183Gallus gallus
 A5D8T8ENSG00000157322Homo sapiens
 Q6UXF7ENSG00000140839Homo sapiens
 Q8NCF0ENSG00000157335Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001283  Cysteine-rich secretory protein, allergen V5/Tpx-1-related
 IPR001304  C-type lectin-like
 IPR013032  EGF-like, conserved site
 IPR014044  CAP domain
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site
 IPR035940  CAP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr