ENSG00000140987


Homo sapiens

Features
Gene ID: ENSG00000140987
  
Biological name :ZSCAN32
  
Synonyms : Q9NX65 / zinc finger and SCAN domain containing 32 / ZSCAN32
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p13.3
Gene start: 3382081
Gene end: 3401065
  
Corresponding Affymetrix probe sets: 218937_at (Human Genome U133 Plus 2.0 Array)   220292_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000461600
Ensembl peptide - ENSP00000483210
Ensembl peptide - ENSP00000302502
Ensembl peptide - ENSP00000380057
Ensembl peptide - ENSP00000380061
Ensembl peptide - ENSP00000391787
Ensembl peptide - ENSP00000407312
Ensembl peptide - ENSP00000458899
Ensembl peptide - ENSP00000459069
Ensembl peptide - ENSP00000459772
Ensembl peptide - ENSP00000459960
Ensembl peptide - ENSP00000460487
Ensembl peptide - ENSP00000460833
NCBI entrez gene - 54925     See in Manteia.
RefSeq - NM_001324346
RefSeq - NM_001284527
RefSeq - NM_001284528
RefSeq - NM_001284529
RefSeq - NM_001324340
RefSeq - NM_001324341
RefSeq - NM_001324342
RefSeq - NM_001324343
RefSeq - NM_001324344
RefSeq - NM_001324345
RefSeq - NM_017810
RefSeq - XM_005255403
RefSeq - XM_011522555
RefSeq - XM_017023371
RefSeq - XM_017023372
RefSeq - XM_017023373
RefSeq Peptide - NP_060280
RefSeq Peptide - NP_001271457
RefSeq Peptide - NP_001271458
RefSeq Peptide - NP_001311269
RefSeq Peptide - NP_001311270
RefSeq Peptide - NP_001311271
RefSeq Peptide - NP_001311272
RefSeq Peptide - NP_001311273
RefSeq Peptide - NP_001311274
RefSeq Peptide - NP_001311275
RefSeq Peptide - NP_001271456
swissprot - B4DR24
swissprot - Q9NX65
swissprot - I3L3Y8
swissprot - I3L4W6
swissprot - I3L1K0
swissprot - I3L1S7
swissprot - I3L2L7
swissprot - I3L2V3
swissprot - I3L3J2
Ensembl - ENSG00000140987
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8IWY8 / ZSCAN29 / zinc finger and SCAN domain containing 29ENSG0000014026543
Q63HK3 / ZKSCAN2 / zinc finger with KRAB and SCAN domains 2ENSG0000015559242
P17040 / ZSCAN20 / zinc finger and SCAN domain containing 20ENSG0000012190339


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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