ENSG00000155592


Homo sapiens

Features
Gene ID: ENSG00000155592
  
Biological name :ZKSCAN2
  
Synonyms : Q63HK3 / zinc finger with KRAB and SCAN domains 2 / ZKSCAN2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p12.1
Gene start: 25236001
Gene end: 25257931
  
Corresponding Affymetrix probe sets: 232019_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000331626
Ensembl peptide - ENSP00000455586
NCBI entrez gene - 342357     See in Manteia.
RefSeq - XM_017023200
RefSeq - NM_001012981
RefSeq Peptide - NP_001012999
swissprot - Q63HK3
swissprot - H3BQ35
Ensembl - ENSG00000155592
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Zkscan2ENSMUSG00000030757Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8IWY8 / ZSCAN29 / zinc finger and SCAN domain containing 29ENSG0000014026545
P17040 / ZSCAN20 / zinc finger and SCAN domain containing 20ENSG0000012190340
Q9NX65 / ZSCAN32 / zinc finger and SCAN domain containing 32ENSG0000014098730


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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