ENSG00000121903


Homo sapiens

Features
Gene ID: ENSG00000121903
  
Biological name :ZSCAN20
  
Synonyms : P17040 / zinc finger and SCAN domain containing 20 / ZSCAN20
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p35.1
Gene start: 33472645
Gene end: 33496507
  
Corresponding Affymetrix probe sets: 1552498_at (Human Genome U133 Plus 2.0 Array)   1552499_a_at (Human Genome U133 Plus 2.0 Array)   1554790_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000355053
Ensembl peptide - ENSP00000362512
NCBI entrez gene - 7579     See in Manteia.
OMIM - 611315
RefSeq - XM_017002240
RefSeq - NM_145238
RefSeq - XM_017002238
RefSeq - XM_017002239
RefSeq - XM_005271171
RefSeq - XM_006710874
RefSeq - XM_006710876
RefSeq - XM_017002237
RefSeq Peptide - NP_660281
swissprot - P17040
Ensembl - ENSG00000121903
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B2KFW1ENSMUSG00000061894Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8IWY8 / ZSCAN29 / zinc finger and SCAN domain containing 29ENSG0000014026537
Q63HK3 / ZKSCAN2 / zinc finger with KRAB and SCAN domains 2ENSG0000015559237
Q9NX65 / ZSCAN32 / zinc finger and SCAN domain containing 32ENSG0000014098726


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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