ENSMUSG00000061894


Mus musculus

Features
Gene ID: ENSMUSG00000061894
  
Biological name :Zscan20
  
Synonyms : B2KFW1 / zinc finger and SCAN domains 20 / Zscan20
  
Possible biological names infered from orthology : P17040 / zinc finger and SCAN domain containing 20
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.2
Gene start: 128583539
Gene end: 128610098
  
Corresponding Affymetrix probe sets: 10516507 (MoGene1.0st)   1436280_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119338
Ensembl peptide - ENSMUSP00000123585
Ensembl peptide - ENSMUSP00000121315
Ensembl peptide - ENSMUSP00000095487
NCBI entrez gene - 269585     See in Manteia.
MGI - MGI:2679268
RefSeq - XM_011240547
RefSeq - XM_011240542
RefSeq - XM_011240543
RefSeq - XM_011240544
RefSeq - XM_011240545
RefSeq - XM_011240546
RefSeq - NM_177758
RefSeq - XM_006503131
RefSeq - XM_006503133
RefSeq - XM_006503134
RefSeq Peptide - NP_808426
swissprot - E9Q8Y3
swissprot - B2KFW1
swissprot - B1AS95
swissprot - B1AS94
Ensembl - ENSMUSG00000061894
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P17040ENSG00000121903Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zscan29 / zinc finger SCAN domains 29 / Q8IWY8* / zinc finger and SCAN domain containing 29*ENSMUSG0000005061933
Zkscan2 / zinc finger with KRAB and SCAN domains 2 / Q63HK3*ENSMUSG0000003075733
Gm45902ENSMUSG000000513963


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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