ENSMUSG00000030757


Mus musculus

Features
Gene ID: ENSMUSG00000030757
  
Biological name :Zkscan2
  
Synonyms : zinc finger with KRAB and SCAN domains 2 / Zkscan2
  
Possible biological names infered from orthology : Q63HK3
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: F3
Gene start: 123475384
Gene end: 123500449
  
Corresponding Affymetrix probe sets: 10567725 (MoGene1.0st)   1436599_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041821
Ensembl peptide - ENSMUSP00000122270
Ensembl peptide - ENSMUSP00000134381
NCBI entrez gene - 210162     See in Manteia.
MGI - MGI:2444060
RefSeq - NM_001081329
RefSeq Peptide - NP_001074798
swissprot - G3X952
swissprot - G3UZ80
swissprot - F7BPE8
Ensembl - ENSMUSG00000030757
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q63HK3ENSG00000155592Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zscan29 / zinc finger SCAN domains 29 / Q8IWY8* / zinc finger and SCAN domain containing 29*ENSMUSG0000005061943
B2KFW1 / Zscan20 / zinc finger and SCAN domains 20 / P17040* / zinc finger and SCAN domain containing 20*ENSMUSG0000006189436
Gm45902ENSMUSG000000513962


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr