ENSMUSG00000050619


Mus musculus

Features
Gene ID: ENSMUSG00000050619
  
Biological name :Zscan29
  
Synonyms : zinc finger SCAN domains 29 / Zscan29
  
Possible biological names infered from orthology : Q8IWY8 / zinc finger and SCAN domain containing 29
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: E5
Gene start: 121158273
Gene end: 121171125
  
Corresponding Affymetrix probe sets: 10486712 (MoGene1.0st)   1431259_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000078033
Ensembl peptide - ENSMUSP00000125987
Ensembl peptide - ENSMUSP00000120997
Ensembl peptide - ENSMUSP00000106289
NCBI entrez gene - 99334     See in Manteia.
MGI - MGI:2139317
RefSeq - XM_006500482
RefSeq - NM_001290819
RefSeq - NM_001290820
RefSeq Peptide - NP_001277749
RefSeq Peptide - NP_001277748
swissprot - B7ZCX1
swissprot - E9Q5B4
swissprot - A2ARU6
swissprot - A2ARU5
Ensembl - ENSMUSG00000050619
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8IWY8ENSG00000140265Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zkscan2 / zinc finger with KRAB and SCAN domains 2 / Q63HK3*ENSMUSG0000003075749
B2KFW1 / Zscan20 / zinc finger and SCAN domains 20 / P17040* / zinc finger and SCAN domain containing 20*ENSMUSG0000006189441
Gm45902ENSMUSG000000513963


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr