ENSG00000142623


Homo sapiens

Features
Gene ID: ENSG00000142623
  
Biological name :PADI1
  
Synonyms : PADI1 / peptidyl arginine deiminase 1 / Q9ULC6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p36.13
Gene start: 17205126
Gene end: 17246005
  
Corresponding Affymetrix probe sets: 220962_s_at (Human Genome U133 Plus 2.0 Array)   223739_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000364620
NCBI entrez gene - 29943     See in Manteia.
OMIM - 607934
RefSeq - XM_017001103
RefSeq - NM_013358
RefSeq - XM_017001101
RefSeq - XM_017001102
RefSeq - XM_011541307
RefSeq Peptide - NP_037490
swissprot - Q9ULC6
Ensembl - ENSG00000142623
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PADI1ENSGALG00000039572Gallus gallus
 PADILENSGALG00000031373Gallus gallus
 Padi1ENSMUSG00000025329Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PADI3 / Q9ULW8 / peptidyl arginine deiminase 3ENSG0000014261958
PADI4 / Q9UM07 / peptidyl arginine deiminase 4ENSG0000015933957
PADI2 / Q9Y2J8 / peptidyl arginine deiminase 2ENSG0000011711553
PADI6 / Q6TGC4 / peptidyl arginine deiminase 6ENSG0000027674745


Protein motifs (from Interpro)
Interpro ID Name
 IPR004303  Protein-arginine deiminase
 IPR008972  Cupredoxin
 IPR013530  Protein-arginine deiminase, C-terminal
 IPR013732  Protein-arginine deiminase (PAD) N-terminal
 IPR013733  Protein-arginine deiminase (PAD), central domain
 IPR036556  Protein-arginine deiminase, central domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization TAS
 biological_processGO:0018101 protein citrullination IEA
 biological_processGO:0036414 histone citrullination IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004668 protein-arginine deiminase activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Chromatin modifying enzymes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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