ENSG00000143028


Homo sapiens

Features
Gene ID: ENSG00000143028
  
Biological name :SYPL2
  
Synonyms : Q5VXT5 / synaptophysin like 2 / SYPL2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p13.3
Gene start: 109466628
Gene end: 109482137
  
Corresponding Affymetrix probe sets: 230611_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358888
NCBI entrez gene - 284612     See in Manteia.
RefSeq - XM_011541285
RefSeq - NM_001040709
RefSeq - XM_011541283
RefSeq - XM_011541284
RefSeq Peptide - NP_001035799
swissprot - Q5VXT5
Ensembl - ENSG00000143028
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sypl2aENSDARG00000055307Danio rerio
 sypl2bENSDARG00000000690Danio rerio
 SYPL2ENSGALG00000032619Gallus gallus
 Sypl2ENSMUSG00000027887Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYNPR / Q8TBG9 / synaptoporinENSG0000016363043
SYP / P08247 / synaptophysinENSG0000010200342
SYPL1 / Q16563 / synaptophysin like 1ENSG0000000828235


Protein motifs (from Interpro)
Interpro ID Name
 IPR001285  Synaptophysin/synaptoporin
 IPR008253  Marvel domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006874 cellular calcium ion homeostasis IEA
 biological_processGO:0021762 substantia nigra development HEP
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030285 integral component of synaptic vesicle membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr