ENSDARG00000055307


Danio rerio

Features
Gene ID: ENSDARG00000055307
  
Biological name :sypl2a
  
Synonyms : synaptophysin-like 2a / sypl2a
  
Possible biological names infered from orthology : O89104 / Q5VXT5 / synaptophysin like 2 / Synaptophysin-like protein 2 / SYPL2
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 36355348
Gene end: 36376073
  
Corresponding Affymetrix probe sets: Dr.20951.1.S1_at (Zebrafish Array)   Dr.25595.1.A1_at (Zebrafish Array)   NM_200667_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000115067
Ensembl peptide - ENSDARP00000137278
NCBI entrez gene - 393640     See in Manteia.
RefSeq - NM_200667
RefSeq Peptide - NP_956961
swissprot - F1Q7F9
swissprot - A0A0R4IMJ7
ZFIN ID - ZDB-GENE-040426-1434
Ensembl - ENSDARG00000055307
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYPL2ENSGALG00000032619Gallus gallus
 SYPL2ENSG00000143028Homo sapiens
 Sypl2ENSMUSG00000027887Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sypl2b / synaptophysin-like 2b / SYPL2* / Q5VXT5* / O89104* / synaptophysin like 2* / Synaptophysin-like protein 2 *ENSDARG0000000069058
sypl1 / synaptophysin-like 1 / Sypl* / Q16563* / O09117* / synaptophysin-like protein*ENSDARG0000007735647
SYNPR / si:dkey-30j16.3 / Q8BGN8* / Q8TBG9* / synaptoporin*ENSDARG0000003758745
sypb / synaptophysin b / SYP* / P08247* / Q62277* / synaptophysin*ENSDARG0000000223044
sypa / synaptophysin a / SYP* / P08247* / Q62277* / synaptophysin*ENSDARG0000011052842
synpr / synaptoporin / Q8BGN8* / Q8TBG9*ENSDARG0000004427837


Protein motifs (from Interpro)
Interpro ID Name
 IPR001285  Synaptophysin/synaptoporin
 IPR008253  Marvel domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030285 integral component of synaptic vesicle membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr