ENSDARG00000002230


Danio rerio

Features
Gene ID: ENSDARG00000002230
  
Biological name :sypb
  
Synonyms : synaptophysin b / sypb
  
Possible biological names infered from orthology : P08247 / Q62277 / synaptophysin / SYP
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 49403668
Gene end: 49432061
  
Corresponding Affymetrix probe sets: Dr.11716.1.S1_at (Zebrafish Array)   Dr.11716.2.A1_at (Zebrafish Array)   Dr.25455.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000025420
Ensembl peptide - ENSDARP00000099412
Ensembl peptide - ENSDARP00000082673
NCBI entrez gene - 436774     See in Manteia.
swissprot - B0S6H7
swissprot - B0S6H6
swissprot - F1RDG3
ZFIN ID - ZDB-GENE-040718-205
Ensembl - ENSDARG00000002230
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYPENSG00000102003Homo sapiens
 SypENSMUSG00000031144Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sypa / synaptophysin a / SYP* / P08247* / Q62277* / synaptophysin*ENSDARG0000011052872
SYNPR / si:dkey-30j16.3 / Q8BGN8* / Q8TBG9* / synaptoporin*ENSDARG0000003758755
synpr / synaptoporin / Q8BGN8* / Q8TBG9*ENSDARG0000004427842
sypl2b / synaptophysin-like 2b / SYPL2* / Q5VXT5* / O89104* / synaptophysin like 2* / Synaptophysin-like protein 2 *ENSDARG0000000069036
sypl2a / synaptophysin-like 2a / SYPL2* / Q5VXT5* / O89104* / synaptophysin like 2* / Synaptophysin-like protein 2 *ENSDARG0000005530735
sypl1 / synaptophysin-like 1 / Sypl* / Q16563* / O09117* / synaptophysin-like protein*ENSDARG0000007735634


Protein motifs (from Interpro)
Interpro ID Name
 IPR001285  Synaptophysin/synaptoporin
 IPR008253  Marvel domain
 IPR028714  Synaptophysin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048168 regulation of neuronal synaptic plasticity IEA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030285 integral component of synaptic vesicle membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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