ENSDARG00000110528


Danio rerio

Features
Gene ID: ENSDARG00000110528
  
Biological name :sypa
  
Synonyms : synaptophysin a / sypa
  
Possible biological names infered from orthology : P08247 / Q62277 / synaptophysin / SYP
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 22930627
Gene end: 22953964
  
Corresponding Affymetrix probe sets: Dr.11049.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000145061
Ensembl peptide - ENSDARP00000063095
NCBI entrez gene - 559698     See in Manteia.
RefSeq - NM_001143977
RefSeq Peptide - NP_001137449
swissprot - B0S5B9
ZFIN ID - ZDB-GENE-031104-2
Ensembl - ENSDARG00000110528
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYPENSG00000102003Homo sapiens
 SypENSMUSG00000031144Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sypb / synaptophysin b / SYP* / P08247* / Q62277* / synaptophysin*ENSDARG0000000223072
SYNPR / si:dkey-30j16.3 / Q8BGN8* / Q8TBG9* / synaptoporin*ENSDARG0000003758755
synpr / synaptoporin / Q8BGN8* / Q8TBG9*ENSDARG0000004427841
sypl2b / synaptophysin-like 2b / SYPL2* / Q5VXT5* / O89104* / synaptophysin like 2* / Synaptophysin-like protein 2 *ENSDARG0000000069037
sypl1 / synaptophysin-like 1 / Sypl* / Q16563* / O09117* / synaptophysin-like protein*ENSDARG0000007735636
sypl2a / synaptophysin-like 2a / SYPL2* / Q5VXT5* / O89104* / synaptophysin like 2* / Synaptophysin-like protein 2 *ENSDARG0000005530734


Protein motifs (from Interpro)
Interpro ID Name
 IPR001285  Synaptophysin/synaptoporin
 IPR008253  Marvel domain
 IPR028714  Synaptophysin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048168 regulation of neuronal synaptic plasticity IBA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030285 integral component of synaptic vesicle membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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