ENSDARG00000044278


Danio rerio

Features
Gene ID: ENSDARG00000044278
  
Biological name :synpr
  
Synonyms : synaptoporin / synpr
  
Possible biological names infered from orthology : Q8BGN8 / Q8TBG9
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 41223204
Gene end: 41229787
  
Corresponding Affymetrix probe sets: Dr.14053.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000065012
NCBI entrez gene - 368919     See in Manteia.
RefSeq - NM_001004532
RefSeq Peptide - NP_001004532
swissprot - Q801U9
ZFIN ID - ZDB-GENE-030616-625
Ensembl - ENSDARG00000044278
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYNPRENSGALG00000007284Gallus gallus
 SYNPRENSG00000163630Homo sapiens
 SynprENSMUSG00000056296Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYNPR / si:dkey-30j16.3 / Q8BGN8* / Q8TBG9* / synaptoporin*ENSDARG0000003758751
sypb / synaptophysin b / SYP* / P08247* / Q62277* / synaptophysin*ENSDARG0000000223044
sypa / synaptophysin a / SYP* / P08247* / Q62277* / synaptophysin*ENSDARG0000011052843
sypl2b / synaptophysin-like 2b / SYPL2* / Q5VXT5* / O89104* / synaptophysin like 2* / Synaptophysin-like protein 2 *ENSDARG0000000069033
sypl1 / synaptophysin-like 1 / Sypl* / Q16563* / O09117* / synaptophysin-like protein*ENSDARG0000007735632
sypl2a / synaptophysin-like 2a / SYPL2* / Q5VXT5* / O89104* / synaptophysin like 2* / Synaptophysin-like protein 2 *ENSDARG0000005530731


Protein motifs (from Interpro)
Interpro ID Name
 IPR001285  Synaptophysin/synaptoporin
 IPR008253  Marvel domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030285 integral component of synaptic vesicle membrane IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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