ENSG00000143786


Homo sapiens

Features
Gene ID: ENSG00000143786
  
Biological name :CNIH3
  
Synonyms : CNIH3 / cornichon family AMPA receptor auxiliary protein 3 / Q8TBE1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q42.12
Gene start: 224434660
Gene end: 224740549
  
Corresponding Affymetrix probe sets: 214841_at (Human Genome U133 Plus 2.0 Array)   238503_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000272133
NCBI entrez gene - 149111     See in Manteia.
RefSeq - NM_001322303
RefSeq - NM_001322304
RefSeq - NM_001322305
RefSeq - NM_152495
RefSeq - NM_001322302
RefSeq Peptide - NP_001309231
RefSeq Peptide - NP_001309232
RefSeq Peptide - NP_001309233
RefSeq Peptide - NP_001309234
RefSeq Peptide - NP_689708
swissprot - Q8TBE1
Ensembl - ENSG00000143786
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cnih3ENSDARG00000014953Danio rerio
 CNIH3ENSGALG00000009308Gallus gallus
 3 ENSMUSG00000026514Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CNIH2 / Q6PI25 / cornichon family AMPA receptor auxiliary protein 2ENSG0000017487180
CNIH1 / O95406 / cornichon family AMPA receptor auxiliary protein 1ENSG0000010052868
CNIH4 / Q9P003 / cornichon family AMPA receptor auxiliary protein 4ENSG0000014377128


Protein motifs (from Interpro)
Interpro ID Name
 IPR003377  Cornichon
 IPR033466  Cornichon, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0035249 synaptic transmission, glutamatergic IEA
 biological_processGO:0042391 regulation of membrane potential IEA
 biological_processGO:0048208 COPII vesicle coating TAS
 biological_processGO:2000311 regulation of AMPA receptor activity IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0012507 ER to Golgi transport vesicle membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0032281 AMPA glutamate receptor complex IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane TAS
 cellular_componentGO:0043198 dendritic shaft IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane ISS
 molecular_functionGO:0016247 channel regulator activity IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000155511 GRIA1 / P42261 / glutamate ionotropic receptor AMPA type subunit 1  / complex / reaction






 

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