ENSG00000145912


Homo sapiens

Features
Gene ID: ENSG00000145912
  
Biological name :NHP2
  
Synonyms : NHP2 / NHP2 ribonucleoprotein / Q9NX24
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q35.3
Gene start: 178149460
Gene end: 178153967
  
Corresponding Affymetrix probe sets: 209104_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000366276
Ensembl peptide - ENSP00000431126
Ensembl peptide - ENSP00000423849
Ensembl peptide - ENSP00000423803
Ensembl peptide - ENSP00000274606
NCBI entrez gene - 55651     See in Manteia.
OMIM - 606470
RefSeq - NM_001034833
RefSeq - NM_017838
RefSeq Peptide - NP_001030005
RefSeq Peptide - NP_060308
swissprot - Q9NX24
swissprot - D6RC52
swissprot - H0YC83
swissprot - J3QSY4
swissprot - D6RCB9
Ensembl - ENSG00000145912
  
Related genetic diseases (OMIM): 613987 - Dyskeratosis congenita, autosomal recessive 2, 613987
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nhp2ENSDARG00000069422Danio rerio
 NHP2ENSGALG00000033666Gallus gallus
 Nhp2ENSMUSG00000001056Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002415  H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
 IPR004038  Ribosomal protein L7Ae/L30e/S12e/Gadd45
 IPR018492  Ribosomal protein L7Ae/L8/Nhp2 family
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000469 cleavage involved in rRNA processing IBA
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006412 translation IBA
 biological_processGO:0007004 telomere maintenance via telomerase TAS
 biological_processGO:0031118 rRNA pseudouridine synthesis ISS
 biological_processGO:0031120 snRNA pseudouridine synthesis IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:1904874 positive regulation of telomerase RNA localization to Cajal body IMP
 cellular_componentGO:0000784 nuclear chromosome, telomeric region HDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005697 telomerase holoenzyme complex TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005732 small nucleolar ribonucleoprotein complex ISS
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0031429 box H/ACA snoRNP complex TAS
 cellular_componentGO:0072589 box H/ACA scaRNP complex TAS
 cellular_componentGO:0090661 box H/ACA telomerase RNP complex TAS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030515 snoRNA binding ISS
 molecular_functionGO:0034513 box H/ACA snoRNA binding IPI
 molecular_functionGO:0070034 telomerase RNA binding IPI


Pathways (from Reactome)
Pathway description
Telomere Extension By Telomerase
rRNA modification in the nucleus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000008 Abnormality of female internal genitalia 
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 HP:0000029 Testicular atrophy 
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 HP:0000035 Abnormality of the testis 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000327 Hypoplasia of the maxilla "Underdevelopment of the `Maxilla` (FMA:9711)." [HPO:probinson]
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 HP:0000365 Hearing loss 
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 HP:0000498 Blepharitis "Inflammation of the eyelids." [HPO:curators]
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 HP:0000499 Abnormality of the eyelashes "An abnormality of the `eyelashes` (FMA:53669)." [HPO:probinson]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000534 Abnormality of the eyebrow "An abnormality of the `eyebrow` (FMA:54237)." [HPO:probinson]
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 HP:0000579 Nasolacrimal duct obstruction 
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 HP:0000600 Abnormality of the pharynx 
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 HP:0000653 Sparse eyelashes "Decreased density/number of eyelashes." [pmid:19125427]
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 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
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 HP:0000670 Carious teeth 
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 HP:0000679 Taurodontia 
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 HP:0000691 Microdontia 
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 HP:0000704 Periodontal disease 
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 HP:0000819 Diabetes mellitus 
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0000953 Hyperpigmentation 
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 HP:0000975 Hyperhidrosis "An abnormally increased perspiration." [HPO:probinson]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0001034 Hyperpigmented macules 
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 HP:0001053 Hypopigmented skin patches 
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 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
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 HP:0001249 Mental retardation 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001394 Cirrhosis 
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 HP:0001395 Hepatic fibrosis 
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 HP:0001399 Hepatic failure 
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 HP:0001510 Growth retardation 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001792 Nail hypoplasia "Underdeveloped `fingernails` (FMA:54327) or `toenails` (FMA:54328)." [HPO:probinson]
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 HP:0001873 Thrombocytopenia 
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 HP:0001874 Abnormality of neutrophil 
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 HP:0001876 Pancytopenia 
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 HP:0001903 Anemia 
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 HP:0001915 Aplastic anemia 
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 HP:0001928 Abnormality of coagulation 
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 HP:0002024 Malabsorption 
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 HP:0002043 Esophageal stricture 
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 HP:0002164 Nail dysplasia 
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 HP:0002165 Pterygium formation (nails) 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002206 Pulmonary fibrosis 
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 HP:0002209 Sparse scalp hair "Sparseness of the `head hair` (FMA:54241)." [HPO:probinson]
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 HP:0002216 Premature graying of hair 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0002575 Tracheoesophageal fistula "An abnormal connection (fistula) between the esophagus and the trachea." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002665 Lymphoma "A cancer originating in lymphocytes and presenting as a solid tumor of lymhpoid cells." [HPO:curators]
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 HP:0002745 Oral leukoplakia 
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002894 Pancreatic cancer 
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 HP:0003812 Phenotypic variability 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005374 Cellular immunodeficiency 
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 HP:0005528 Bone marrow hypoplasia 
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 HP:0007427 Reticulated skin pigmentation 
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 HP:0008065 Aplasia/Hypoplasia of the skin 
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0008070 Sparse hair 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0008661 Urethral stenosis 
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 HP:0009926 Increased tear production "Abnormally in creased lacrimation." [HPO:curators]
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 HP:0010450 Esophageal stenosis "An abnormal narrowing of the lumen of the esophagus." [HPO:curators]
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 HP:0010624 Aplastic/hypoplastic toenails 
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 HP:0010885 Aseptic necrosis "A disease where there is cellular death (necrosis) of bone components due to interruption of the blood supply." [HPO:sdoelken]
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 HP:0011364 White hair "Hypopigmented hair that appears white." [DDD:cmoss]
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 HP:0012732 Anorectal anomaly "An abnormality of the anus or rectum." [HPO:probinson]
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 HP:0100585 Teleangiectasia of the skin 
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 HP:0100627 Displacement of the external urethral meatus "A displacement of the external urethral orifice from its normal position (in males normally placed at the tip of glans penis, in females normally placed about 2.5 cm behind the glans clitoridis and immediately in front of that of the vagina)." [HPO:sdoelken]
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 HP:0100670 Rough bone trabeculation 
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 HP:0200037 skin vesicle "A circumscribed, fluid-containing, epidermal elevation generally considered less than 10mm in diameter at the widest point." [HPO:SKOEHLER]
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 HP:0200042 skin ulcer "A discontinuity of the skin exhibiting complete loss of the epidermis and often portions of the dermis and even subcutaneous fat." [HPO:SKOEHLER]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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