ENSG00000151474


Homo sapiens

Features
Gene ID: ENSG00000151474
  
Biological name :FRMD4A
  
Synonyms : FERM domain containing 4A / FRMD4A / Q9P2Q2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: p13
Gene start: 13643706
Gene end: 14462142
  
Corresponding Affymetrix probe sets: 1554033_at (Human Genome U133 Plus 2.0 Array)   1554034_a_at (Human Genome U133 Plus 2.0 Array)   1560031_at (Human Genome U133 Plus 2.0 Array)   208475_at (Human Genome U133 Plus 2.0 Array)   208476_s_at (Human Genome U133 Plus 2.0 Array)   225163_at (Human Genome U133 Plus 2.0 Array)   225167_at (Human Genome U133 Plus 2.0 Array)   225168_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000474863
Ensembl peptide - ENSP00000473870
Ensembl peptide - ENSP00000487974
Ensembl peptide - ENSP00000492091
Ensembl peptide - ENSP00000488764
Ensembl peptide - ENSP00000488325
Ensembl peptide - ENSP00000264546
Ensembl peptide - ENSP00000350032
NCBI entrez gene - 55691     See in Manteia.
OMIM - 616305
RefSeq - XM_017016395
RefSeq - XM_005252490
RefSeq - XM_006717457
RefSeq - XM_006717458
RefSeq - XM_006717459
RefSeq - XM_006717460
RefSeq - XM_011519539
RefSeq - XM_011519540
RefSeq - XM_011519541
RefSeq - XM_011519543
RefSeq - XM_017016393
RefSeq - XM_017016394
RefSeq - NM_001318336
RefSeq - NM_001318337
RefSeq - NM_018027
RefSeq - XM_005252489
RefSeq Peptide - NP_060497
RefSeq Peptide - NP_001305265
RefSeq Peptide - NP_001305266
swissprot - S4R324
swissprot - S4R3Y6
swissprot - A0A0J9YWI3
swissprot - Q5T376
swissprot - A0A1W2PQE7
swissprot - Q9P2Q2
swissprot - A0A0J9YYA7
swissprot - A0A0J9YXB2
Ensembl - ENSG00000151474
  
Related genetic diseases (OMIM): 616819 - ?Corpus callosum, agenesis of, with facial anomalies and cerebellar ataxia, 616819
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FRMD4AENSDARG00000042249Danio rerio
 FRMD4AENSGALG00000034992Gallus gallus
 Frmd4aENSMUSG00000026657Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FRMD4B / Q9Y2L6 / FERM domain containing 4BENSG0000011454148
INAVA / Q3KP66 / innate immunity activatorENSG0000016336218
Q96HB5 / CCDC120 / coiled-coil domain containing 120ENSG0000014714415


Protein motifs (from Interpro)
Interpro ID Name
 IPR000299  FERM domain
 IPR011993  PH-like domain superfamily
 IPR014352  FERM/acyl-CoA-binding protein superfamily
 IPR018979  FERM, N-terminal
 IPR018980  FERM, C-terminal PH-like domain
 IPR019747  FERM conserved site
 IPR019748  FERM central domain
 IPR019749  Band 4.1 domain
 IPR021774  Domain of unknown function DUF3338
 IPR029071  Ubiquitin-like domain superfamily
 IPR035963  FERM superfamily, second domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0090162 establishment of epithelial cell polarity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005912 adherens junction IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0030674 protein binding, bridging IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000179 Prominent lower lip "Increased thickness of the lower lip, leading to a prominent appearance of the lower lip." [HPO:curators]
Show

 HP:0000232 Everted lower lip 
Show

 HP:0000294 Low frontal hairline "A condition in which the scalp hair is present at lower than usual areas of the forehead." [HPO:curators]
Show

 HP:0000341 Narrow forehead "An abnormally reduced side-to-side width of the forehead." [HPO:curators]
Show

 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
Show

 HP:0000368 Low-set, posteriorly rotated ears 
Show

 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
Show

 HP:0000411 Protruding ears 
Show

 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000527 Long eyelashes "Mid upper eyelash length >10 mm or increased length of the eyelashes (subjective)." [pmid:19125427]
Show

 HP:0000574 Thick eyebrows 
Show

 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
Show

 HP:0001249 Mental retardation 
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
Show

 HP:0001320 Cerebellar vermis hypoplasia 
Show

 HP:0001321 Cerebellar hypoplasia 
Show

 HP:0001344 Absent speech development 
Show

 HP:0001510 Growth retardation 
Show

 HP:0002465 Poor speech 
Show

 HP:0002470 Cerebellar ataxia, nonprogressive 
Show

 HP:0002509 Limb hypertonia 
Show

 HP:0002553 Arched eyebrows 
Show

 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
Show

 HP:0008070 Sparse hair 
Show

 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
Show

 HP:0011451 Congenital microcephaly "Microcephaly (HP:0000252) that is present already at the time of birth." [HPO:probinson]
Show

 HP:0012724 Upper eyelid edema "Edema in the region of the upper eyelid." [HPO:probinson]
Show

 HP:0100540 Palpebral edema 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr