ENSG00000153130


Homo sapiens

Features
Gene ID: ENSG00000153130
  
Biological name :SCOC
  
Synonyms : Q9UIL1 / SCOC / short coiled-coil protein
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q31.1
Gene start: 140257286
Gene end: 140385726
  
Corresponding Affymetrix probe sets: 223341_s_at (Human Genome U133 Plus 2.0 Array)   224786_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477352
Ensembl peptide - ENSP00000477812
Ensembl peptide - ENSP00000345262
Ensembl peptide - ENSP00000377751
Ensembl peptide - ENSP00000377753
Ensembl peptide - ENSP00000377755
Ensembl peptide - ENSP00000421355
Ensembl peptide - ENSP00000424605
Ensembl peptide - ENSP00000424688
Ensembl peptide - ENSP00000426649
Ensembl peptide - ENSP00000426810
NCBI entrez gene - 60592     See in Manteia.
RefSeq - NM_001153552
RefSeq - NM_001153446
RefSeq - NM_001153484
RefSeq - NM_001153585
RefSeq - NM_001153635
RefSeq - NM_001153663
RefSeq - NM_001153690
RefSeq - NM_032547
RefSeq Peptide - NP_001147162
RefSeq Peptide - NP_115936
RefSeq Peptide - NP_001146956
RefSeq Peptide - NP_001147024
RefSeq Peptide - NP_001147057
RefSeq Peptide - NP_001146918
RefSeq Peptide - NP_001147107
RefSeq Peptide - NP_001147135
swissprot - A0A0C4DGB0
swissprot - Q9UIL1
Ensembl - ENSG00000153130
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scocaENSDARG00000087333Danio rerio
 scocbENSDARG00000002217Danio rerio
 SCOCENSGALG00000009813Gallus gallus
 ScocENSMUSG00000063253Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019357  Short coiled-coil protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016239 positive regulation of macroautophagy IDA
 biological_processGO:0061635 regulation of protein complex stability IMP
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IDA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000120805 ARL1 / P40616 / ADP ribosylation factor like GTPase 1  / complex / reaction






 

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