ENSG00000156990


Homo sapiens

Features
Gene ID: ENSG00000156990
  
Biological name :RPUSD3
  
Synonyms : Q6P087 / RNA pseudouridylate synthase domain containing 3 / RPUSD3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p25.3
Gene start: 9837849
Gene end: 9844602
  
Corresponding Affymetrix probe sets: 1555916_at (Human Genome U133 Plus 2.0 Array)   1561329_s_at (Human Genome U133 Plus 2.0 Array)   1566602_at (Human Genome U133 Plus 2.0 Array)   1566603_s_at (Human Genome U133 Plus 2.0 Array)   225743_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000408693
Ensembl peptide - ENSP00000405054
Ensembl peptide - ENSP00000415616
Ensembl peptide - ENSP00000373331
Ensembl peptide - ENSP00000395446
Ensembl peptide - ENSP00000395492
Ensembl peptide - ENSP00000396405
Ensembl peptide - ENSP00000398921
Ensembl peptide - ENSP00000400397
NCBI entrez gene - 285367     See in Manteia.
OMIM - 617759
RefSeq - XM_011533627
RefSeq - NM_001142547
RefSeq - NM_173659
RefSeq Peptide - NP_001136019
RefSeq Peptide - NP_775930
swissprot - H7C2C3
swissprot - H7C454
swissprot - Q6P087
swissprot - C9JM75
swissprot - H7C0K7
swissprot - H7C0R9
swissprot - H7C0K9
swissprot - H7C1H7
Ensembl - ENSG00000156990
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6DBR0ENSDARG00000012674Danio rerio
 Q14AI6ENSMUSG00000051169Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96CM3 / RPUSD4 / RNA pseudouridylate synthase domain containing 4ENSG0000016552625


Protein motifs (from Interpro)
Interpro ID Name
 IPR006145  Pseudouridine synthase, RsuA/RluB/C/D/E/F
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0009982 pseudouridine synthase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0019239 deaminase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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