ENSG00000165526


Homo sapiens

Features
Gene ID: ENSG00000165526
  
Biological name :RPUSD4
  
Synonyms : Q96CM3 / RNA pseudouridylate synthase domain containing 4 / RPUSD4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q24.2
Gene start: 126202094
Gene end: 126211692
  
Corresponding Affymetrix probe sets: 225398_at (Human Genome U133 Plus 2.0 Array)   236109_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000433709
Ensembl peptide - ENSP00000298317
Ensembl peptide - ENSP00000433065
NCBI entrez gene - 84881     See in Manteia.
OMIM - 617488
RefSeq - XM_011543039
RefSeq - NM_001144827
RefSeq - NM_032795
RefSeq Peptide - NP_001138299
RefSeq Peptide - NP_116184
swissprot - Q96CM3
swissprot - E9PJV3
Ensembl - ENSG00000165526
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6DBR0ENSDARG00000012674Danio rerio
 RPUSD4ENSGALG00000024326Gallus gallus
 Q9CWX4ENSMUSG00000032044Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6P087 / RPUSD3 / RNA pseudouridylate synthase domain containing 3ENSG0000015699024


Protein motifs (from Interpro)
Interpro ID Name
 IPR006145  Pseudouridine synthase, RsuA/RluB/C/D/E/F
 IPR006224  Pseudouridine synthase, RluC/RluD, conserved site
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0009982 pseudouridine synthase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0019239 deaminase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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