ENSGALG00000024326


Gallus gallus

Features
Gene ID: ENSGALG00000024326
  
Biological name :RPUSD4
  
Synonyms : RNA pseudouridylate synthase domain containing 4 / RPUSD4
  
Possible biological names infered from orthology : Mitochondrial RNA pseudouridine synthase Rpusd4 / Q96CM3 / Q9CWX4
  
Species: Gallus gallus
  
Chr. number: 24
Strand: -1
Band:
Gene start: 308799
Gene end: 313560
  
Corresponding Affymetrix probe sets: Gga.1463.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000040321
Ensembl peptide - ENSGALP00000064212
NCBI entrez gene - 768808     See in Manteia.
RefSeq - XM_015298096
RefSeq - XM_001231936
swissprot - E1BYI6
swissprot - A0A1L1RZC9
Ensembl - ENSGALG00000024326
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6DBR0ENSDARG00000012674Danio rerio
 Q96CM3ENSG00000165526Homo sapiens
 Q9CWX4ENSMUSG00000032044Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006145  Pseudouridine synthase, RsuA/RluB/C/D/E/F
 IPR006224  Pseudouridine synthase, RluC/RluD, conserved site
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IBA
 molecular_functionGO:0019239 deaminase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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