ENSMUSG00000032044


Mus musculus

Features
Gene ID: ENSMUSG00000032044
  
Biological name :Rpusd4
  
Synonyms : Mitochondrial RNA pseudouridine synthase Rpusd4 / Q9CWX4 / Rpusd4
  
Possible biological names infered from orthology : Q96CM3 / RNA pseudouridylate synthase domain containing 4
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: A4
Gene start: 35267865
Gene end: 35277731
  
Corresponding Affymetrix probe sets: 10584200 (MoGene1.0st)   1452710_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034543
Ensembl peptide - ENSMUSP00000120327
NCBI entrez gene - 71989     See in Manteia.
MGI - MGI:1919239
RefSeq - NM_028040
RefSeq Peptide - NP_082316
swissprot - F6W6X9
swissprot - Q9CWX4
Ensembl - ENSMUSG00000032044
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6DBR0ENSDARG00000012674Danio rerio
 RPUSD4ENSGALG00000024326Gallus gallus
 Q96CM3ENSG00000165526Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q14AI6 / Rpusd3 / RNA pseudouridylate synthase domain containing 3 / Q6P087*ENSMUSG0000005116926


Protein motifs (from Interpro)
Interpro ID Name
 IPR006145  Pseudouridine synthase, RsuA/RluB/C/D/E/F
 IPR006224  Pseudouridine synthase, RluC/RluD, conserved site
 IPR020103  Pseudouridine synthase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031119 tRNA pseudouridine synthesis IBA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IBA
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0019239 deaminase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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