ENSG00000160131


Homo sapiens

Features
Gene ID: ENSG00000160131
  
Biological name :VMA21
  
Synonyms : Q3ZAQ7 / VMA21 / VMA21, vacuolar ATPase assembly factor
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q28
Gene start: 151396515
Gene end: 151409364
  
Corresponding Affymetrix probe sets: 225556_at (Human Genome U133 Plus 2.0 Array)   235237_at (Human Genome U133 Plus 2.0 Array)   242474_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000333255
Ensembl peptide - ENSP00000359386
NCBI entrez gene - 203547     See in Manteia.
OMIM - 300913
RefSeq - XM_011531125
RefSeq - NM_001017980
RefSeq Peptide - NP_001017980
swissprot - Q3ZAQ7
Ensembl - ENSG00000160131
  
Related genetic diseases (OMIM): 310440 - Myopathy, X-linked, with excessive autophagy, 310440
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vma21ENSDARG00000093945Danio rerio
 VMA21ENSGALG00000009065Gallus gallus
 Vma21ENSMUSG00000073131Mus musculus
 Vma21-psENSMUSG00000061619Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019013  Vacuolar ATPase assembly integral membrane protein Vma21


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043462 regulation of ATPase activity TAS
 biological_processGO:0070072 vacuolar proton-transporting V-type ATPase complex assembly TAS
 cellular_componentGO:0005764 lysosome IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0012507 ER to Golgi transport vesicle membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0001270 Motor retardation 
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0002093 Respiratory insufficiency 
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 HP:0002486 Myotonia "Myotonia is characterized by an abnormally slow relaxation of the muscles after voluntary contraction or electrical stimulation. During physical examination, myotonia may be elicited by asking the patient to make a tight fist and then quickly open the hand." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0003198 Myopathy 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003391 Gower sign "A phenomen whereby patients are not able to stand up without the use of the hands owing to weakness of the proximal muscles of the lower limbs." [HPO:probinson]
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 HP:0003551 Difficulty climbing stairs 
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 HP:0003677 Slow progression 
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 HP:0003829 Incomplete penetrance 
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 HP:0007941 Limited extraocular movements 
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 HP:0008994 Proximal muscle weakness in lower limbs "A lack of strength of the proximal muscles of the legs." [HPO:curators]
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 HP:0009046 Difficulty walking, running, climbing stairs 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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