ENSGALG00000009065


Gallus gallus

Features
Gene ID: ENSGALG00000009065
  
Biological name :VMA21
  
Synonyms : vacuolar ATPase assembly integral membrane protein VMA21 / VMA21
  
Possible biological names infered from orthology : Q3ZAQ7 / Q78T54 / Vma21-ps / VMA21, vacuolar ATPase assembly factor / VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) / VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), pseudogene
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 17574361
Gene end: 17579308
  
Corresponding Affymetrix probe sets: Gga.16111.1.S1_at (Chicken Array)   GgaAffx.11827.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000060918
Ensembl peptide - ENSGALP00000014737
NCBI entrez gene - 422385     See in Manteia.
RefSeq - NM_001031127
RefSeq Peptide - NP_001026298
swissprot - F1NGQ8
swissprot - A0A1L1RQ44
Ensembl - ENSGALG00000009065
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vma21ENSDARG00000093945Danio rerio
 VMA21ENSG00000160131Homo sapiens
 Vma21ENSMUSG00000073131Mus musculus
 Vma21-psENSMUSG00000061619Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019013  Vacuolar ATPase assembly integral membrane protein Vma21


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0012507 ER to Golgi transport vesicle membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr