ENSG00000160963


Homo sapiens

Features
Gene ID: ENSG00000160963
  
Biological name :COL26A1
  
Synonyms : COL26A1 / collagen type XXVI alpha 1 chain / Q96A83
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q22.1
Gene start: 101362820
Gene end: 101559024
  
Corresponding Affymetrix probe sets: 229080_at (Human Genome U133 Plus 2.0 Array)   233894_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000318234
Ensembl peptide - ENSP00000482102
NCBI entrez gene - 136227     See in Manteia.
OMIM - 608927
RefSeq - XM_017011745
RefSeq - NM_001278563
RefSeq - NM_133457
RefSeq - XM_017011743
RefSeq - XM_017011744
RefSeq Peptide - NP_001265492
RefSeq Peptide - NP_597714
swissprot - Q96A83
Ensembl - ENSG00000160963
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COL26A1ENSGALG00000043223Gallus gallus
 Q91VF6ENSMUSG00000004415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EMID1 / Q96A84 / EMI domain containing 1ENSG0000018699842
Q9Y6C2 / EMILIN1 / elastin microfibril interfacer 1ENSG0000013808027
Q9BXX0 / EMILIN2 / elastin microfibril interfacer 2ENSG0000013220520
Q9NT22 / EMILIN3 / elastin microfibril interfacer 3ENSG0000018379817


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat
 IPR011489  EMI domain
 IPR016133  Insect cysteine-rich antifreeze protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IEA
 biological_processGO:0030574 collagen catabolic process TAS
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0031012 extracellular matrix HDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Collagen degradation
Collagen biosynthesis and modifying enzymes
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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