ENSG00000161847


Homo sapiens

Features
Gene ID: ENSG00000161847
  
Biological name :RAVER1
  
Synonyms : Q8IY67 / RAVER1 / ribonucleoprotein, PTB binding 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.2
Gene start: 10316212
Gene end: 10333640
  
Corresponding Affymetrix probe sets: 223425_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468375
Ensembl peptide - ENSP00000482486
Ensembl peptide - ENSP00000482277
Ensembl peptide - ENSP00000479520
Ensembl peptide - ENSP00000293677
Ensembl peptide - ENSP00000465753
NCBI entrez gene - 125950     See in Manteia.
OMIM - 609950
RefSeq - NM_133452
RefSeq - XM_011527671
RefSeq Peptide - NP_597709
swissprot - Q8IY67
swissprot - K7ERR4
swissprot - A0A087WZ13
swissprot - K7EKR9
swissprot - E9PAU2
Ensembl - ENSG00000161847
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 raver1ENSDARG00000052617Danio rerio
 Q9CW46ENSMUSG00000010205Mus musculus
 Q9CW46ENSMUSG00000111497Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9HCJ3 / RAVER2 / ribonucleoprotein, PTB binding 2ENSG0000016243736
AC011511.4ENSG0000026730314


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034633  Ribonucleoprotein PTB-binding 1, RNA recognition motif 1
 IPR034635  Ribonucleoprotein PTB-binding 1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IBA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr