ENSMUSG00000111497


Mus musculus

Features
Gene ID: ENSMUSG00000111497
  
Biological name :Raver1
  
Synonyms : Q9CW46 / Raver1 / Ribonucleoprotein PTB-binding 1
  
Possible biological names infered from orthology : Q8IY67
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: A3
Gene start: 21067514
Gene end: 21091997
  
Corresponding Affymetrix probe sets: 10591423 (MoGene1.0st)   10591430 (MoGene1.0st)   1427110_at (Mouse Genome 430 2.0 Array)   1427111_s_at (Mouse Genome 430 2.0 Array)   1430293_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000151195
Ensembl peptide - ENSMUSP00000149675
MGI - MGI:1919016
MGI - MGI:5621316
swissprot - Q9CW46
swissprot - A0A158RFV1
swissprot - A0A1L1SRY4
Ensembl - ENSMUSG00000111497
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 raver1ENSDARG00000052617Danio rerio
 Q8IY67ENSG00000161847Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9CW46 / Raver1 / ribonucleoprotein, PTB-binding 1 / Q8IY67*ENSMUSG00000010205100
Q7TPD6 / Raver2 / Ribonucleoprotein PTB-binding 2 / Q9HCJ3*ENSMUSG0000003527534


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001473 reduced long term potentiation "less than the normal persistent robust synaptic response induced by synchronous stimulation of pre- and postsynaptic cells " [Principles of Neural Science:ISBN 0-8385-8034-3]
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Allelic Composition: Novtm1Cabo/Novtm1Cabo
Genetic Background: involves: 129S/SvEv

 MP:0001475 reduced long term depression "less than the normal, persistent activity-dependent decrease in synaptic efficacy between neurons, often following slow, weak stimulation of CA1 neurons" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, Principles of Neural Science:ISBN 0-8385-8034-3]
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Allelic Composition: Novtm1Cabo/Novtm1Cabo
Genetic Background: involves: 129S/SvEv

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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