ENSG00000162408


Homo sapiens

Features
Gene ID: ENSG00000162408
  
Biological name :NOL9
  
Synonyms : NOL9 / nucleolar protein 9 / Q5SY16
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.31
Gene start: 6521347
Gene end: 6554535
  
Corresponding Affymetrix probe sets: 1554082_a_at (Human Genome U133 Plus 2.0 Array)   1554084_a_at (Human Genome U133 Plus 2.0 Array)   218754_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000366934
NCBI entrez gene - 79707     See in Manteia.
RefSeq - XM_017002339
RefSeq - NM_024654
RefSeq - XM_005263493
RefSeq - XM_017002338
RefSeq Peptide - NP_078930
swissprot - Q5SY16
Ensembl - ENSG00000162408
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nol9ENSDARG00000077751Danio rerio
 NOL9ENSGALG00000028958Gallus gallus
 Nol9ENSMUSG00000028948Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR032319  Polyribonucleotide 5"-hydroxyl-kinase Clp1, P-loop domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0000460 maturation of 5.8S rRNA IMP
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0016310 phosphorylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding TAS
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0051731 polynucleotide 5"-hydroxyl-kinase activity IDA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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