ENSG00000162631


Homo sapiens

Features
Gene ID: ENSG00000162631
  
Biological name :NTNG1
  
Synonyms : netrin G1 / NTNG1 / Q9Y2I2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p13.3
Gene start: 107140007
Gene end: 107483458
  
Corresponding Affymetrix probe sets: 206713_at (Human Genome U133 Plus 2.0 Array)   236088_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359090
Ensembl peptide - ENSP00000359082
Ensembl peptide - ENSP00000359083
Ensembl peptide - ENSP00000359084
Ensembl peptide - ENSP00000359091
Ensembl peptide - ENSP00000359085
Ensembl peptide - ENSP00000359088
NCBI entrez gene - 22854     See in Manteia.
OMIM - 608818
RefSeq - XM_017000686
RefSeq - NM_001113226
RefSeq - NM_001113228
RefSeq - NM_001312688
RefSeq - NM_014917
RefSeq - XM_011541025
RefSeq - XM_017000680
RefSeq - XM_017000681
RefSeq - XM_017000682
RefSeq - XM_017000683
RefSeq - XM_017000684
RefSeq - XM_017000685
RefSeq - XM_006710455
RefSeq - XM_006710456
RefSeq - XM_011541021
RefSeq - XM_011541024
RefSeq Peptide - NP_055732
RefSeq Peptide - NP_001299617
RefSeq Peptide - NP_001317594
RefSeq Peptide - NP_001106699
RefSeq Peptide - NP_001106697
swissprot - X5DNW2
swissprot - Q9Y2I2
Ensembl - ENSG00000162631
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ntng1aENSDARG00000014973Danio rerio
 vav3bENSDARG00000073713Danio rerio
 NTNG1ENSGALG00000031122Gallus gallus
 Ntng1ENSMUSG00000059857Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NTNG2 / Q96CW9 / netrin G2ENSG0000019635857
NTN1 / O95631 / netrin 1ENSG0000006532029
NTN3 / O00634 / netrin 3ENSG0000016206827
USH2A / O75445 / usherinENSG0000004278122
NTN5 / Q8WTR8 / netrin 5ENSG0000014223319
MEGF9 / Q9H1U4 / multiple EGF like domains 9ENSG0000010678013


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR002049  Laminin EGF domain
 IPR008211  Laminin, N-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR013032  EGF-like, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006501 C-terminal protein lipidation TAS
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007409 axonogenesis ISS
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0046658 anchored component of plasma membrane ISS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Post-translational modification: synthesis of GPI-anchored proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000343 Long philtrum 
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 HP:0000365 Hearing loss 
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000445 Broad nose 
Show

 HP:0000787 Kidney stones 
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 HP:0001163 Abnormality of the metacarpal bones 
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 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002119 Ventriculomegaly 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002213 Fine hair 
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002376 Developmental regression 
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0007360 Aplasia/Hypoplasia of the cerebellum 
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 HP:0009896 Abnormality of the antitragus "An abnormality of the antitrgus, which is a small tubercle opposite to the tragus of the ear. The antitragus and the tragus are separated by the intertragic notch." [HPO:curators]
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 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
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 HP:0100022 Abnormality of movement "An abnormality of movement with a neurological basis characterized by changes in coordination and speed of voluntary movements." [HPO:probinson]
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 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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