ENSG00000163833


Homo sapiens

Features
Gene ID: ENSG00000163833
  
Biological name :FBXO40
  
Synonyms : F-box protein 40 / FBXO40 / Q9UH90
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q13.33
Gene start: 121593119
Gene end: 121630295
  
Corresponding Affymetrix probe sets: 220164_s_at (Human Genome U133 Plus 2.0 Array)   222954_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000337510
NCBI entrez gene - 51725     See in Manteia.
OMIM - 609107
RefSeq - NM_016298
RefSeq Peptide - NP_057382
swissprot - Q9UH90
Ensembl - ENSG00000163833
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fbxo40.1ENSDARG00000069775Danio rerio
 fbxo40.2ENSDARG00000091119Danio rerio
 FBXO40ENSGALG00000013999Gallus gallus
 Fbxo40ENSMUSG00000047746Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FBXO30 / Q8TB52 / F-box protein 30ENSG0000011849634


Protein motifs (from Interpro)
Interpro ID Name
 IPR001293  Zinc finger, TRAF-type
 IPR001810  F-box domain
 IPR008974  TRAF-like
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031890  F-box only protein 30/40
 IPR036047  F-box-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination TAS
 biological_processGO:0042692 muscle cell differentiation IEA
 biological_processGO:0043687 post-translational protein modification TAS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0004842 ubiquitin-protein transferase activity TAS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr