ENSMUSG00000047746


Mus musculus

Features
Gene ID: ENSMUSG00000047746
  
Biological name :Fbxo40
  
Synonyms : Fbxo40 / Mus musculus F-box protein 40 (Fbxo40), transcript variant 1, mRNA. / P62932
  
Possible biological names infered from orthology : F-box protein 40 / Q9UH90
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: B3
Gene start: 36963460
Gene end: 36990467
  
Corresponding Affymetrix probe sets: 10439357 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000075266
Ensembl peptide - ENSMUSP00000110454
NCBI entrez gene - 207215     See in Manteia.
MGI - MGI:2443753
RefSeq - XM_006521883
RefSeq - NM_001037321
RefSeq - NM_001358217
RefSeq - XM_006521881
RefSeq - XM_006521882
RefSeq Peptide - NP_001032398
RefSeq Peptide - NP_001345146
swissprot - Q3KN92
swissprot - P62932
Ensembl - ENSMUSG00000047746
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fbxo40.1ENSDARG00000069775Danio rerio
 fbxo40.2ENSDARG00000091119Danio rerio
 FBXO40ENSGALG00000013999Gallus gallus
 FBXO40ENSG00000163833Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Fbxo30 / Q8BJL1 / F-box only protein 30 / Q8TB52* / F-box protein 30*ENSMUSG0000004764833


Protein motifs (from Interpro)
Interpro ID Name
 IPR001293  Zinc finger, TRAF-type
 IPR001810  F-box domain
 IPR008974  TRAF-like
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031890  F-box only protein 30/40
 IPR036047  F-box-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0042692 muscle cell differentiation IEP
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity ISO
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr