ENSG00000165102


Homo sapiens

Features
Gene ID: ENSG00000165102
  
Biological name :HGSNAT
  
Synonyms : heparan-alpha-glucosaminide N-acetyltransferase / HGSNAT / Q68CP4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: p11.21
Gene start: 43140455
Gene end: 43202855
  
Corresponding Affymetrix probe sets: 1557064_s_at (Human Genome U133 Plus 2.0 Array)   218017_s_at (Human Genome U133 Plus 2.0 Array)   222491_at (Human Genome U133 Plus 2.0 Array)   227564_at (Human Genome U133 Plus 2.0 Array)   238090_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000368965
Ensembl peptide - ENSP00000430151
Ensembl peptide - ENSP00000430032
Ensembl peptide - ENSP00000429109
Ensembl peptide - ENSP00000429029
Ensembl peptide - ENSP00000428322
NCBI entrez gene - 138050     See in Manteia.
OMIM - 610453
RefSeq - XM_017013089
RefSeq - XM_017013088
RefSeq - XM_005273412
RefSeq - XM_005273411
RefSeq - NM_152419
RefSeq - XM_005273409
RefSeq - XM_005273410
RefSeq Peptide - NP_689632
swissprot - Q68CP4
swissprot - E5RJN0
swissprot - H0YAZ0
swissprot - E5RGH7
swissprot - E5RH11
swissprot - E5RJC4
Ensembl - ENSG00000165102
  
Related genetic diseases (OMIM): 252930 - Mucopolysaccharidosis type IIIC (Sanfilippo C), 252930
  616544 - Retinitis pigmentosa 73, 616544
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hgsnatENSDARG00000077804Danio rerio
 HGSNATENSGALG00000010136Gallus gallus
 HgsnatENSMUSG00000037260Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR012429  Domain of unknown function DUF1624
 IPR032176  Domain of unknown function DUF5009


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006027 glycosaminoglycan catabolic process TAS
 biological_processGO:0007041 lysosomal transport IDA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0051259 protein complex oligomerization IDA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0035579 specific granule membrane TAS
 cellular_componentGO:0070821 tertiary granule membrane TAS
 molecular_functionGO:0015019 heparan-alpha-glucosaminide N-acetyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA


Pathways (from Reactome)
Pathway description
HS-GAG degradation
MPS IIIC - Sanfilippo syndrome C
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000035 Abnormality of the testis 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000232 Everted lower lip 
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 HP:0000250 Dense calvaria "An abnormal increase of density of the bones making up the calvaria." [HPO:curators]
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 HP:0000268 Dolichocephaly 
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 HP:0000280 Coarse facial features 
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 HP:0000365 Hearing loss 
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000563 Keratoconus "A cone-shaped deformity of the cornea." [HPO:curators]
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 HP:0000602 Ophthalmoplegia 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000662 Night blindness 
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 HP:0000664 Synophrys "Fusion of the left and right `eyebrow` (FMA:54237)." [HPO:probinson]
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 HP:0000752 Hyperactivity 
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 HP:0000842 Hyperinsulinemia 
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 HP:0000900 Thickened ribs 
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 HP:0000943 Dysostosis multiplex 
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 HP:0000987 Scarring 
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 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
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 HP:0001105 Retinal atrophy 
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 HP:0001133 Constricted visual fields 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001270 Motor retardation 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001507 Growth abnormality 
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0001670 Asymmetric septal hypertrophy 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0002014 Diarrhea 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002159 Heparan sulfate excretion in urine 
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 HP:0002208 Coarse hair 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002333 Motor deterioration 
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0002371 Loss of speech 
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 HP:0002751 Kyphoscoliosis 
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 HP:0002788 Recurrent upper respiratory tract infections 
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 HP:0003309 Ovoid thoracolumbar vertebrae 
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 HP:0003653 Metachromasia of white blood cells and fibroblasts 
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 HP:0003828 Variable expressivity 
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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 HP:0007675 Progressive night blindness 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0008046 Abnormality of the retinal vasculature 
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 HP:0008736 Hypoplasia of penis 
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 HP:0100790 Hernia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000165102 HGSNAT / Q68CP4 / heparan-alpha-glucosaminide N-acetyltransferase  / -






 

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