ENSG00000165288


Homo sapiens

Features
Gene ID: ENSG00000165288
  
Biological name :BRWD3
  
Synonyms : bromodomain and WD repeat domain containing 3 / BRWD3 / Q6RI45
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q21.1
Gene start: 80670854
Gene end: 80809688
  
Corresponding Affymetrix probe sets: 1553252_a_at (Human Genome U133 Plus 2.0 Array)   235156_at (Human Genome U133 Plus 2.0 Array)   244738_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000362372
NCBI entrez gene - 254065     See in Manteia.
OMIM - 300553
RefSeq - XM_017029384
RefSeq - NM_153252
RefSeq - XM_005262113
RefSeq Peptide - NP_694984
swissprot - Q6RI45
Ensembl - ENSG00000165288
  
Related genetic diseases (OMIM): 300659 - Mental retardation, X-linked 93, 300659
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 brwd3ENSDARG00000035540Danio rerio
 BRWD3ENSGALG00000007151Gallus gallus
 Brwd3ENSMUSG00000063663Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BRWD1 / Q9NSI6 / bromodomain and WD repeat domain containing 1ENSG0000018565856
PHIP / Q8WWQ0 / pleckstrin homology domain interacting proteinENSG0000014624756


Protein motifs (from Interpro)
Interpro ID Name
 IPR001487  Bromodomain
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR036322  WD40-repeat-containing domain superfamily
 IPR036427  Bromodomain-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0007010 cytoskeleton organization IMP
 biological_processGO:0008360 regulation of cell shape IMP
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000276 Long face 
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 HP:0000378 Cup-shaped ears "Small auricles that grow forward over the meatus (ear canal)." [HPO:curators]
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 HP:0000400 Large ears 
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 HP:0000750 Impaired language development 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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