ENSG00000165533


Homo sapiens

Features
Gene ID: ENSG00000165533
  
Biological name :TTC8
  
Synonyms : Q8TAM2 / tetratricopeptide repeat domain 8 / TTC8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: 1
Band: q31.3
Gene start: 88824153
Gene end: 88881078
  
Corresponding Affymetrix probe sets: 226120_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000451034
Ensembl peptide - ENSP00000450993
Ensembl peptide - ENSP00000451955
Ensembl peptide - ENSP00000482721
Ensembl peptide - ENSP00000482306
Ensembl peptide - ENSP00000452354
Ensembl peptide - ENSP00000298324
Ensembl peptide - ENSP00000337653
Ensembl peptide - ENSP00000339486
Ensembl peptide - ENSP00000346427
Ensembl peptide - ENSP00000351439
Ensembl peptide - ENSP00000370031
Ensembl peptide - ENSP00000445067
Ensembl peptide - ENSP00000450905
Ensembl peptide - ENSP00000450951
NCBI entrez gene - 123016     See in Manteia.
OMIM - 608132
RefSeq - XM_017020978
RefSeq - NM_001288781
RefSeq - NM_001288782
RefSeq - NM_001288783
RefSeq - NM_144596
RefSeq - NM_198309
RefSeq - NM_198310
RefSeq - XM_006720035
RefSeq - XM_006720037
RefSeq - XM_011536432
RefSeq - XM_011536433
RefSeq - XM_011536434
RefSeq - XM_011536435
RefSeq - XM_017020977
RefSeq Peptide - NP_001275711
RefSeq Peptide - NP_653197
RefSeq Peptide - NP_938051
RefSeq Peptide - NP_938052
RefSeq Peptide - NP_001275712
RefSeq Peptide - NP_001275710
swissprot - G3V324
swissprot - H0YJQ3
swissprot - H0YJX0
swissprot - Q86U25
swissprot - A0A0C4DFT4
swissprot - Q8TAM2
swissprot - A0A0C4DGY3
swissprot - A0A0C4DGX9
swissprot - A0A0C4DGH8
swissprot - G3V2W6
swissprot - G3V2Z9
Ensembl - ENSG00000165533
  
Related genetic diseases (OMIM): 613464 - ?Retinitis pigmentosa 51, 613464
  615985 - Bardet-Biedl syndrome 8, 615985
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TTC8ENSGALG00000010663Gallus gallus
 Ttc8ENSMUSG00000021013Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BBS4 / Q96RK4 / Bardet-Biedl syndrome 4ENSG0000014046317


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR028796  Tetratricopeptide repeat protein 8
 IPR036388  Winged helix-like DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001736 establishment of planar polarity IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0007608 sensory perception of smell IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0021772 olfactory bulb development IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0032880 regulation of protein localization IEA
 biological_processGO:0034260 negative regulation of GTPase activity IEA
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0045444 fat cell differentiation IEA
 biological_processGO:0048560 establishment of anatomical structure orientation IMP
 biological_processGO:0050893 sensory processing TAS
 biological_processGO:0051492 regulation of stress fiber assembly IEA
 biological_processGO:0060122 inner ear receptor cell stereocilium organization IEA
 biological_processGO:0060219 camera-type eye photoreceptor cell differentiation IEA
 biological_processGO:0060271 cilium assembly TAS
 biological_processGO:0061326 renal tubule development IEA
 biological_processGO:0072659 protein localization to plasma membrane IEA
 biological_processGO:1903251 multi-ciliated epithelial cell differentiation IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005929 cilium IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0032391 photoreceptor connecting cilium IEA
 cellular_componentGO:0034464 BBSome IDA
 cellular_componentGO:0036064 ciliary basal body IDA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0060170 ciliary membrane IEA
 molecular_functionGO:0001103 RNA polymerase II repressing transcription factor binding IPI
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
BBSome-mediated cargo-targeting to cilium


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000003 Multicystic kidney "Multicystic dysplasia of the kidney is characterized by multiple cysts of varying size in the kidney and the absence of a normal pelvocaliceal system. The condition is associated with ureteral or ureteropelvic atresia, and the affected kidney is nonfunctional." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000035 Abnormality of the testis 
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000100 Nephrotic syndrome 
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 HP:0000110 Renal dysplasia 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000426 Prominent nasal bridge 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000470 Short neck 
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000563 Keratoconus "A cone-shaped deformity of the cornea." [HPO:curators]
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 HP:0000580 Pigmentary retinopathy 
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 HP:0000602 Ophthalmoplegia 
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 HP:0000608 Macular degeneration 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000662 Night blindness 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000842 Hyperinsulinemia 
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 HP:0000987 Scarring 
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 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001395 Hepatic fibrosis 
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0001696 Situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the major thoracic and abdominal organs." [HPO:curators]
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 HP:0002167 Neurological speech impairment 
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 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005978 Noninsulin-dependent diabetes mellitus 
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0007663 Decreased central vision 
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 HP:0007675 Progressive night blindness 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0007737 Bony spicule pigmentary retinopathy 
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 HP:0007843 Attenuation of retinal blood vessels 
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 HP:0008046 Abnormality of the retinal vasculature 
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 HP:0008323 Abnormal rod and cone electroretinograms 
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 HP:0008724 Hypoplastic ovary 
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 HP:0008736 Hypoplasia of penis 
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 HP:0010442 Polydactyly 
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 HP:0010747 Medial flaring of the eyebrow "An abnormal distribution of eyebrow hair growth in the medial direction." [HPO:probinson]
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 HP:0011003 Severe Myopia 
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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