ENSG00000166441


Homo sapiens

Features
Gene ID: ENSG00000166441
  
Biological name :RPL27A
  
Synonyms : P46776 / ribosomal protein L27a / RPL27A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p15.4
Gene start: 8682411
Gene end: 8714759
  
Corresponding Affymetrix probe sets: 203034_s_at (Human Genome U133 Plus 2.0 Array)   212044_s_at (Human Genome U133 Plus 2.0 Array)   223707_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000432671
Ensembl peptide - ENSP00000433259
Ensembl peptide - ENSP00000437118
Ensembl peptide - ENSP00000435333
Ensembl peptide - ENSP00000435081
Ensembl peptide - ENSP00000433766
Ensembl peptide - ENSP00000346015
Ensembl peptide - ENSP00000431565
Ensembl peptide - ENSP00000431849
NCBI entrez gene - 6157     See in Manteia.
OMIM - 603637
RefSeq - NM_000990
RefSeq Peptide - NP_000981
swissprot - E9PKT2
swissprot - E9PJD9
swissprot - H0YF34
swissprot - E9PLX7
swissprot - P46776
swissprot - E9PLL6
Ensembl - ENSG00000166441
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPL27AENSGALG00000005948Gallus gallus
 P14115ENSMUSG00000046364Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001196  Ribosomal protein L15, conserved site
 IPR021131  Ribosomal protein L18e/L15P
 IPR030878  Ribosomal protein L15
 IPR036227  Ribosomal L18e/L15P superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0019083 viral transcription TAS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit TAS
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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