ENSGALG00000005948


Gallus gallus

Features
Gene ID: ENSGALG00000005948
  
Biological name :RPL27A
  
Synonyms : ribosomal protein L27a / RPL27A
  
Possible biological names infered from orthology : 60S ribosomal protein L27a / P14115 / P46776
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 9732157
Gene end: 9735693
  
Corresponding Affymetrix probe sets: Gga.9087.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009552
Ensembl peptide - ENSGALP00000062689
Ensembl peptide - ENSGALP00000060253
Ensembl peptide - ENSGALP00000055979
Ensembl peptide - ENSGALP00000044945
NCBI entrez gene - 770018     See in Manteia.
RefSeq - NM_001277663
RefSeq Peptide - NP_001264592
swissprot - A0A1D5PSU0
swissprot - A0A1L1RV36
swissprot - F1NBX4
swissprot - A0A1D5NX52
swissprot - A0A1L1RN84
Ensembl - ENSGALG00000005948
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P46776ENSG00000166441Homo sapiens
 P14115ENSMUSG00000046364Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001196  Ribosomal protein L15, conserved site
 IPR021131  Ribosomal protein L18e/L15P
 IPR030878  Ribosomal protein L15


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr