ENSG00000167716


Homo sapiens

Features
Gene ID: ENSG00000167716
  
Biological name :WDR81
  
Synonyms : Q562E7 / WDR81 / WD repeat domain 81
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.3
Gene start: 1716523
Gene end: 1738599
  
Corresponding Affymetrix probe sets: 226738_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000401560
Ensembl peptide - ENSP00000466240
Ensembl peptide - ENSP00000460742
Ensembl peptide - ENSP00000458811
Ensembl peptide - ENSP00000407845
Ensembl peptide - ENSP00000312074
Ensembl peptide - ENSP00000386609
Ensembl peptide - ENSP00000391074
Ensembl peptide - ENSP00000395198
Ensembl peptide - ENSP00000395226
NCBI entrez gene - 124997     See in Manteia.
OMIM - 614218
RefSeq - XM_017024184
RefSeq - NM_001163673
RefSeq - NM_001163809
RefSeq - NM_001163811
RefSeq - NM_152348
RefSeq - XM_011523651
RefSeq Peptide - NP_001157283
RefSeq Peptide - NP_689561
RefSeq Peptide - NP_001157145
RefSeq Peptide - NP_001157281
swissprot - I3L3U7
swissprot - K7ELV8
swissprot - C9JCF9
swissprot - C9JD20
swissprot - I3L1G2
swissprot - Q562E7
swissprot - E9PDG3
Ensembl - ENSG00000167716
  
Related genetic diseases (OMIM): 610185 - Cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2, 610185
  617967 - Hydrocephalus, nonsyndromic, autosomal recessive 3, 617967
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr81ENSDARG00000079702Danio rerio
 WDR81ENSGALG00000026822Gallus gallus
 Wdr81ENSMUSG00000045374Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NBEAL2 / Q6ZNJ1 / neurobeachin like 2ENSG0000016079616
WDFY3 / Q8IZQ1 / WD repeat and FYVE domain containing 3ENSG0000016362514
WDFY4 / Q6ZS81 / WDFY family member 4ENSG0000012881514
NBEA / Q8NFP9 / neurobeachinENSG0000017291514
NBEAL1 / Q6ZS30 / neurobeachin like 1ENSG0000014442614
LYST / Q99698 / lysosomal trafficking regulatorENSG0000014366913
LRBA / P50851 / LPS responsive beige-like anchor proteinENSG0000019858913
NSMAF / Q92636 / neutral sphingomyelinase activation associated factorENSG000000356816


Protein motifs (from Interpro)
Interpro ID Name
 IPR000409  BEACH domain
 IPR001680  WD40 repeat
 IPR011009  Protein kinase-like domain superfamily
 IPR011989  Armadillo-like helical
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily
 IPR036372  BEACH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IMP
 biological_processGO:0007005 mitochondrion organization ISS
 biological_processGO:0010923 negative regulation of phosphatase activity IDA
 biological_processGO:0035973 aggrephagy IMP
 biological_processGO:0043551 regulation of phosphatidylinositol 3-kinase activity IMP
 biological_processGO:0045022 early endosome to late endosome transport IMP
 biological_processGO:0050821 protein stabilization IMP
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031313 extrinsic component of endosome membrane IDA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0035014 phosphatidylinositol 3-kinase regulator activity IMP
 molecular_functionGO:0070530 K63-linked polyubiquitin modification-dependent protein binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000464 Abnormality of the neck 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000504 Abnormality of vision "Abnormality of eyesight (visual perception)." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000750 Impaired language development 
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 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001310 Dysmetria 
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0002075 Dysdiadochokinesis "An inability to perform rapidly alternating movements, such as rhythmically tapping the fingers on the knee, generally related to a cerebellar lesion." [HPO:curators]
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 HP:0002078 Truncal ataxia 
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002283 Diffuse brain atrophy 
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 HP:0002942 Thoracic kyphosis 
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 HP:0002943 Thoracic scoliosis 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0004279 Hypoplastic hand 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0006887 Mental retardation, progressive "Mental retardation is defined as a decreased intelligence quotient of varying degree. The term progressive mental retardation should be used if intelligence decreases/deteriorates over time." [HPO:curators]
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 HP:0007047 Atrophy of the dentate nucleus 
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 HP:0007063 Aplasia of the inferior half of the cerebellar vermis 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0100021 Cerebral paralysis "Cerebral palsy describes a group of permanent disorders of the development of movement and posture, causing activity limitation, that are attributed to nonprogressive disturbances that occurred in the developing fetal or infant brain. The motor disorders of cerebral palsy are often accompanied by disturbances of sensation, perception, cognition, communication, and behaviour, by epilepsy, and by secondary musculoskeletal problems." [HPO:sdoelken]
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 HP:0200055 Small hands 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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