ENSG00000169946


Homo sapiens

Features
Gene ID: ENSG00000169946
  
Biological name :ZFPM2
  
Synonyms : Q8WW38 / ZFPM2 / zinc finger protein, FOG family member 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q22.3
Gene start: 104590733
Gene end: 105804532
  
Corresponding Affymetrix probe sets: 219778_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000384179
Ensembl peptide - ENSP00000430757
Ensembl peptide - ENSP00000428720
Ensembl peptide - ENSP00000428149
NCBI entrez gene - 23414     See in Manteia.
OMIM - 603693
RefSeq - XM_011516947
RefSeq - XM_011516948
RefSeq - NM_012082
RefSeq Peptide - NP_036214
swissprot - Q8WW38
swissprot - E7ET52
swissprot - E5RJX0
Ensembl - ENSG00000169946
  
Related genetic diseases (OMIM): 187500 - Tetralogy of Fallot, 187500
  610187 - Diaphragmatic hernia 3, 610187
  616067 - 46XY sex reversal 9, 616067

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zfpm2aENSDARG00000040123Danio rerio
 ZFPM2ENSGALG00000040079Gallus gallus
 Zfpm2ENSMUSG00000022306Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZFPM1 / Q8IX07 / zinc finger protein, FOG family member 1ENSG0000017958828


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR034731  Zinc finger CCHC FOG-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001570 vasculogenesis IEA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0003148 outflow tract septum morphogenesis IMP
 biological_processGO:0003221 right ventricular cardiac muscle tissue morphogenesis IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007506 gonadal mesoderm development IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0007596 blood coagulation TAS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0045599 negative regulation of fat cell differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048568 embryonic organ development IEA
 biological_processGO:0048738 cardiac muscle tissue development IEA
 biological_processGO:0060045 positive regulation of cardiac muscle cell proliferation IEA
 biological_processGO:0060412 ventricular septum morphogenesis IMP
 biological_processGO:0060548 negative regulation of cell death IEA
 biological_processGO:2000020 positive regulation of male gonad development IEA
 biological_processGO:2000195 negative regulation of female gonad development IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001085 RNA polymerase II transcription factor binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0008270 zinc ion binding NAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000027 Azoospermia 
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000030 Gonadoblastoma, male 
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 HP:0000045 Abnormality of the scrotum 
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000058 Abnormality of the labia 
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 HP:0000062 Ambiguous genitalia 
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 HP:0000063 Fused labia minora "Fusion of the labia minora as a result of labial adhesions resulting in vaginal obstruction." [HPO:curators]
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 HP:0000100 Nephrotic syndrome 
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 HP:0000133 Gonadal dysgenesis 
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 HP:0000149 Gonadoblastoma, female 
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 HP:0000233 Thin vermillion border 
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 HP:0000268 Dolichocephaly 
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 HP:0000337 Broad forehead "Abnormally large side-to-side distance of the forehead." [HPO:curators]
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 HP:0000520 Proptosis 
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 HP:0000729 Pervasive developmental disorder 
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 HP:0000771 Gynecomastia 
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 HP:0000776 Diaphragmatic hernia "Diaphragmatic hernia is the result of a developmental defect causing an abnormal opening in the diaphragm, through which abdominal organs (stomach, spleen, liver, and intestines) can protrude into the thoracic cavity. This usually causes respiratory distress in the newborn period." [HPO:curators]
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 HP:0000786 Primary amenorrhea 
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 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
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 HP:0000823 Delayed puberty 
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 HP:0000846 Adrenal insufficiency 
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 HP:0000868 Decreased fertility in females 
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0001156 Brachydactyly 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001636 Tetralogy of Fallot "A congenital cardiac malformation comprising pulmonary stenosis, overriding aorta, ventricular septum defect, and right ventricular hypertrophy. The diagnosis of TOF is made if at least three of the four above mentioned features are present." [HPO:curators]
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 HP:0002215 Sparse axillary hair 
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 HP:0002225 Sparse pubic hair 
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 HP:0002667 Nephroblastoma (Wilms tumor) "A kind of renal tumor primarily affecting children. It is characterized by an abnormal proliferation of the metanephric blastema cells, which are believed to be primitive embryologic cells of the kidney. Clinically, nephroblatoma usually presents as an abdominal mass, and in some cases with abdominal pain, hypertension, hematuria, and fever." [HPO:curators]
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0003251 Male infertility 
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0004467 Preauricular sinus "The preauricular sinus is a benign congenital lesion of the preauricular soft tissue consisting of a blind-ending narrow tube or pit. It is also known as preauricular pit, preauricular fistula, preauricular tract and preauricular cyst. It can be asymptomatic or present as an infected and discharging sinus. It presents as a small pit adjacent to the external ear usually located at the anterior margin of the ascending limb of the helix." [HPO:curators]
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 HP:0005105 Abnormal nasal morphology 
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 HP:0008187 Absence of secondary sex characteristics 
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 HP:0008193 Primary gonadal insufficiency 
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 HP:0008214 Decreased serum estradiol 
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 HP:0008230 Decreased testosterone in males 
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 HP:0008232 Elevated follicle stimulating hormone 
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 HP:0008665 Hypertrophic clitoris 
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 HP:0008726 Hypoplastic vagina "Underdevelopment of the vagina." [HPO:curators]
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 HP:0008730 Female external genitalia in males "The presence of female external genitalia in a person with a male karyotype." [HPO:curators]
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 HP:0008734 Decreased testicular size 
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 HP:0009891 Hypoplasia of the supraorbital ridges "Underdevelopment of the supraorbital ridges." [HPO:curators]
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 HP:0010464 Streak ovary "A developmental disorder characterized by the progressive loss of primordial germ cells in the developing ovaries of an embryo, leading to hypoplastic ovaries composed of wavy connective tissue with occasional clumps of granulosa cells, and frequenty mesonephric or hilar cells." [HPO:curators]
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 HP:0011969 Elevated luteinizing hormone "An elevated concentration of luteinizing hormone in the blood." [HPO:probinson]
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 HP:0012244 Abnormal sex determination "Anomaly of primary or secondary sexual development or characteristics." [HPO:probinson, MP:0002210]
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 HP:0012245 Sex reversal "Development of the reproductive system is inconsistent with the chromosomal sex." [HPO:probinson, MP:0005652]
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 HP:0012870 Vanishing testis "A condition which is considered to be due to the subsequent atrophy and disappearance in fetal life of an initially normal testis. In the presence of spermatic cord structures is evidence of the presence of the testis in early intrauterine life. When associated with a blind-ending spermatic cord, this entity is named as his absence of a testis in an otherwise normal 46XY male is usually unilateral and is assumed to be a consequence of intrauterine or perinatal torsion or infarction." [HPO:probinson, pmid:22985611]
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0100779 Urogenital sinus anomaly "A rare birth defect in women where the urethra and vagina both open into a common channel." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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