ENSG00000170043


Homo sapiens

Features
Gene ID: ENSG00000170043
  
Biological name :TRAPPC1
  
Synonyms : Q9Y5R8 / trafficking protein particle complex 1 / TRAPPC1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: p13.1
Gene start: 7930345
Gene end: 7932123
  
Corresponding Affymetrix probe sets: 225294_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000460761
Ensembl peptide - ENSP00000441130
Ensembl peptide - ENSP00000302783
Ensembl peptide - ENSP00000460674
Ensembl peptide - ENSP00000460702
Ensembl peptide - ENSP00000459045
NCBI entrez gene - 58485     See in Manteia.
OMIM - 610969
RefSeq - NM_001166621
RefSeq - NM_021210
RefSeq Peptide - NP_001160093
RefSeq Peptide - NP_067033
swissprot - Q9Y5R8
swissprot - I3L1R8
swissprot - I3L3S0
swissprot - I3L3V5
Ensembl - ENSG00000170043
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc1ENSDARG00000039005Danio rerio
 Q5NCF2ENSMUSG00000049299Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007233  Trafficking protein particle complex subunit
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0048208 COPII vesicle coating TAS
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0030008 TRAPP complex IBA
 cellular_componentGO:0035578 azurophil granule lumen TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Neutrophil degranulation
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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