ENSG00000170468


Homo sapiens

Features
Gene ID: ENSG00000170468
  
Biological name :RIOX1
  
Synonyms : Q9H6W3 / ribosomal oxygenase 1 / RIOX1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: 1
Band: q24.3
Gene start: 73490964
Gene end: 73493392
  
Corresponding Affymetrix probe sets: 219526_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477507
NCBI entrez gene - 79697     See in Manteia.
OMIM - 611919
RefSeq - NM_024644
RefSeq Peptide - NP_078920
swissprot - Q9H6W3
Ensembl - ENSG00000170468
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 riox1ENSDARG00000067838Danio rerio
 C5H14ORF169ENSGALG00000020454Gallus gallus
 Riox1ENSMUSG00000046791Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RIOX2 / Q8IUF8 / ribosomal oxygenase 2ENSG0000017085424


Protein motifs (from Interpro)
Interpro ID Name
 IPR003347  JmjC domain
 IPR013109  Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006338 chromatin remodeling IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030961 peptidyl-arginine hydroxylation IBA
 biological_processGO:0034720 histone H3-K4 demethylation IEA
 biological_processGO:0045668 negative regulation of osteoblast differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0070544 histone H3-K36 demethylation IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEA
 molecular_functionGO:0032453 histone demethylase activity (H3-K4 specific) IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA
 molecular_functionGO:0051864 histone demethylase activity (H3-K36 specific) IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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