ENSG00000170854


Homo sapiens

Features
Gene ID: ENSG00000170854
  
Biological name :RIOX2
  
Synonyms : Q8IUF8 / ribosomal oxygenase 2 / RIOX2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q11.2
Gene start: 97941818
Gene end: 97972457
  
Corresponding Affymetrix probe sets: 1554774_at (Human Genome U133 Plus 2.0 Array)   213188_s_at (Human Genome U133 Plus 2.0 Array)   213189_at (Human Genome U133 Plus 2.0 Array)   229132_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000424530
Ensembl peptide - ENSP00000423816
Ensembl peptide - ENSP00000424955
Ensembl peptide - ENSP00000328251
Ensembl peptide - ENSP00000353395
Ensembl peptide - ENSP00000377748
Ensembl peptide - ENSP00000421347
NCBI entrez gene - 84864     See in Manteia.
OMIM - 612049
RefSeq - XM_005247838
RefSeq - NM_001042533
RefSeq - NM_001261829
RefSeq - NM_032778
RefSeq - NM_153182
RefSeq Peptide - NP_001035998
RefSeq Peptide - NP_001248758
RefSeq Peptide - NP_116167
RefSeq Peptide - NP_694822
swissprot - H0Y8K4
swissprot - D6RCB6
swissprot - Q8IUF8
swissprot - H0Y9L8
Ensembl - ENSG00000170854
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 riox2ENSDARG00000036359Danio rerio
 MINAENSGALG00000039302Gallus gallus
 Riox2ENSMUSG00000022724Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RIOX1 / Q9H6W3 / ribosomal oxygenase 1ENSG0000017046833


Protein motifs (from Interpro)
Interpro ID Name
 IPR003347  JmjC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006338 chromatin remodeling IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0016577 histone demethylation IEA
 biological_processGO:0030961 peptidyl-arginine hydroxylation IBA
 biological_processGO:0034720 histone H3-K4 demethylation IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IBA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0070544 histone H3-K36 demethylation IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0001191 transcriptional repressor activity, RNA polymerase II transcription factor binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0032452 histone demethylase activity TAS
 molecular_functionGO:0032453 histone demethylase activity (H3-K4 specific) IBA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA
 molecular_functionGO:0051864 histone demethylase activity (H3-K36 specific) IBA


Pathways (from Reactome)
Pathway description
HDMs demethylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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