ENSG00000170889


Homo sapiens

Features
Gene ID: ENSG00000170889
  
Biological name :RPS9
  
Synonyms : P46781 / ribosomal protein S9 / RPS9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.42
Gene start: 54200742
Gene end: 54249003
  
Corresponding Affymetrix probe sets: 1557981_at (Human Genome U133 Plus 2.0 Array)   214317_x_at (Human Genome U133 Plus 2.0 Array)   217747_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000399623
Ensembl peptide - ENSP00000391823
Ensembl peptide - ENSP00000406159
Ensembl peptide - ENSP00000485771
Ensembl peptide - ENSP00000414314
Ensembl peptide - ENSP00000302896
Ensembl peptide - ENSP00000375631
Ensembl peptide - ENSP00000375632
Ensembl peptide - ENSP00000375633
Ensembl peptide - ENSP00000383937
NCBI entrez gene - 6203     See in Manteia.
OMIM - 603631
RefSeq - XM_017027112
RefSeq - NM_001013
RefSeq - NM_001321701
RefSeq - NM_001321702
RefSeq - NM_001321704
RefSeq - NM_001321705
RefSeq - NM_001321706
RefSeq Peptide - NP_001308635
RefSeq Peptide - NP_001004
RefSeq Peptide - NP_001308630
RefSeq Peptide - NP_001308631
RefSeq Peptide - NP_001308633
RefSeq Peptide - NP_001308634
swissprot - P46781
swissprot - A8MXK4
swissprot - B5MCT8
swissprot - F2Z3C0
swissprot - C9JM19
Ensembl - ENSG00000170889
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps9ENSDARG00000011405Danio rerio
 Rps9ENSMUSG00000006333Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001912  Ribosomal protein S4/S9, N-terminal
 IPR002942  RNA-binding S4 domain
 IPR005710  Ribosomal protein S4/S9, eukaryotic/archaeal
 IPR018079  Ribosomal protein S4, conserved site
 IPR022801  Ribosomal protein S4/S9
 IPR036986  RNA-binding S4 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0008284 positive regulation of cell proliferation IMP
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0045903 positive regulation of translational fidelity IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0045182 translation regulator activity IMP


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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