ENSMUSG00000006333


Mus musculus

Features
Gene ID: ENSMUSG00000006333
  
Biological name :Rps9
  
Synonyms : 40S ribosomal protein S9 / Q6ZWN5 / Rps9
  
Possible biological names infered from orthology : P46781 / ribosomal protein S9
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: A1
Gene start: 3703993
Gene end: 3706897
  
Corresponding Affymetrix probe sets: 10549588 (MoGene1.0st)   10569069 (MoGene1.0st)   1426958_at (Mouse Genome 430 2.0 Array)   1433689_s_at (Mouse Genome 430 2.0 Array)   1434624_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000104265
Ensembl peptide - ENSMUSP00000120736
Ensembl peptide - ENSMUSP00000116623
Ensembl peptide - ENSMUSP00000114894
Ensembl peptide - ENSMUSP00000006496
Ensembl peptide - ENSMUSP00000104263
Ensembl peptide - ENSMUSP00000104264
NCBI entrez gene - 76846     See in Manteia.
MGI - MGI:1924096
RefSeq - XM_006540420
RefSeq - NM_029767
RefSeq Peptide - NP_084043
swissprot - D3YWH9
swissprot - D3Z673
swissprot - F7CJS8
swissprot - Q6ZWN5
swissprot - Q9CXW7
swissprot - D3YUV6
Ensembl - ENSMUSG00000006333
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps9ENSDARG00000011405Danio rerio
 RPS9ENSG00000170889Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001912  Ribosomal protein S4/S9, N-terminal
 IPR002942  RNA-binding S4 domain
 IPR005710  Ribosomal protein S4/S9, eukaryotic/archaeal
 IPR018079  Ribosomal protein S4, conserved site
 IPR022801  Ribosomal protein S4/S9
 IPR036986  RNA-binding S4 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0045903 positive regulation of translational fidelity IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0045182 translation regulator activity IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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