ENSG00000171466


Homo sapiens

Features
Gene ID: ENSG00000171466
  
Biological name :ZNF562
  
Synonyms : Q6V9R5 / zinc finger protein 562 / ZNF562
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.2
Gene start: 9641808
Gene end: 9675086
  
Corresponding Affymetrix probe sets: 219163_at (Human Genome U133 Plus 2.0 Array)   241089_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000466911
Ensembl peptide - ENSP00000468039
Ensembl peptide - ENSP00000468775
Ensembl peptide - ENSP00000293648
Ensembl peptide - ENSP00000410734
Ensembl peptide - ENSP00000464716
Ensembl peptide - ENSP00000466039
Ensembl peptide - ENSP00000466728
NCBI entrez gene - 54811     See in Manteia.
RefSeq - XM_017026899
RefSeq - NM_001130031
RefSeq - NM_001130032
RefSeq - NM_001300885
RefSeq - NM_017656
RefSeq - XM_005259941
RefSeq - XM_005259944
RefSeq - XM_005259951
RefSeq - XM_005259952
RefSeq - XM_017026898
RefSeq Peptide - NP_001123504
RefSeq Peptide - NP_001287814
RefSeq Peptide - NP_060126
RefSeq Peptide - NP_001123503
swissprot - K7EN01
swissprot - K7ENE4
swissprot - K7EQZ2
swissprot - A0A024R7A3
swissprot - Q6V9R5
swissprot - A0A0G2JLJ0
swissprot - K7EIE6
swissprot - K7ELE4
Ensembl - ENSG00000171466
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Zfp266ENSMUSG00000060510Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8N587 / ZNF561 / zinc finger protein 561ENSG0000017146984
Q96MU6 / ZNF778 / zinc finger protein 778ENSG0000017010045
Q147U1 / ZNF846 / zinc finger protein 846ENSG0000019660545
Q9BUY5 / ZNF426 / zinc finger protein 426ENSG0000013081845
Q9BR84 / ZNF559 / zinc finger protein 559ENSG0000018832143
Q14584 / ZNF266 / zinc finger protein 266ENSG0000017465242
Q96MR9 / ZNF560 / zinc finger protein 560ENSG0000019802840
P58317 / ZNF121 / zinc finger protein 121ENSG0000019796133


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr