ENSG00000171603


Homo sapiens

Features
Gene ID: ENSG00000171603
  
Biological name :CLSTN1
  
Synonyms : calsyntenin 1 / CLSTN1 / O94985
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.22
Gene start: 9729026
Gene end: 9824526
  
Corresponding Affymetrix probe sets: 201561_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000354997
Ensembl peptide - ENSP00000366513
Ensembl peptide - ENSP00000401934
NCBI entrez gene - 22883     See in Manteia.
OMIM - 611321
RefSeq - NM_001302883
RefSeq - NM_001009566
RefSeq - NM_014944
RefSeq Peptide - NP_001009566
RefSeq Peptide - NP_001289812
RefSeq Peptide - NP_055759
swissprot - O94985
swissprot - Q5SR54
Ensembl - ENSG00000171603
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clstn1ENSDARG00000031720Danio rerio
 CLSTN1ENSGALG00000002606Gallus gallus
 Clstn1ENSMUSG00000039953Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLSTN2 / Q9H4D0 / calsyntenin 2ENSG0000015825852
CLSTN3 / Q9BQT9 / calsyntenin 3ENSG0000013918249


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015919  Cadherin-like
 IPR026914  Calsyntenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001558 regulation of cell growth IEA
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0050806 positive regulation of synaptic transmission IEA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0001540 amyloid-beta binding IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019894 kinesin binding IPI
 molecular_functionGO:0042988 X11-like protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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