ENSG00000139182


Homo sapiens

Features
Gene ID: ENSG00000139182
  
Biological name :CLSTN3
  
Synonyms : calsyntenin 3 / CLSTN3 / Q9BQT9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p13.31
Gene start: 7129698
Gene end: 7158945
  
Corresponding Affymetrix probe sets: 204375_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000443959
Ensembl peptide - ENSP00000443468
Ensembl peptide - ENSP00000443490
Ensembl peptide - ENSP00000266546
Ensembl peptide - ENSP00000440679
Ensembl peptide - ENSP00000442612
Ensembl peptide - ENSP00000442801
NCBI entrez gene - 9746     See in Manteia.
OMIM - 611324
RefSeq - XM_006719163
RefSeq - NM_014718
RefSeq Peptide - NP_055533
swissprot - F5H746
swissprot - F5H7C7
swissprot - F5H5D7
swissprot - Q9BQT9
swissprot - F5H5C6
swissprot - F5H172
Ensembl - ENSG00000139182
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clstn3ENSDARG00000073883Danio rerio
 CLSTN3ENSGALG00000014674Gallus gallus
 Clstn3ENSMUSG00000008153Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLSTN1 / O94985 / calsyntenin 1ENSG0000017160351
CLSTN2 / Q9H4D0 / calsyntenin 2ENSG0000015825847


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015919  Cadherin-like
 IPR026914  Calsyntenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001558 regulation of cell growth IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007416 synapse assembly IEA
 biological_processGO:0035249 synaptic transmission, glutamatergic IEA
 biological_processGO:0050806 positive regulation of synaptic transmission IEA
 biological_processGO:0051932 synaptic transmission, GABAergic IEA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 biological_processGO:1902474 positive regulation of protein localization to synapse IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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