ENSGALG00000014674


Gallus gallus

Features
Gene ID: ENSGALG00000014674
  
Biological name :CLSTN3
  
Synonyms : calsyntenin 3 / CLSTN3
  
Possible biological names infered from orthology : Mus musculus calsyntenin 3 (Clstn3), transcript variant 2, mRNA. / Q99JH7 / Q9BQT9
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 77405765
Gene end: 77420676
  
Corresponding Affymetrix probe sets: GgaAffx.9290.1.S1_at (Chicken Array)   GgaAffx.9290.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023600
Ensembl peptide - ENSGALP00000046737
NCBI entrez gene - 418297     See in Manteia.
RefSeq - XM_015293918
swissprot - A0A1D5P242
swissprot - E1C3B9
Ensembl - ENSGALG00000014674
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clstn3ENSDARG00000073883Danio rerio
 CLSTN3ENSG00000139182Homo sapiens
 Clstn3ENSMUSG00000008153Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLSTN1 / calsyntenin 1 / O94985* / Q9EPL2* / Calsyntenin-1 Soluble Alc-alpha CTF1-alpha*ENSGALG0000000260648
CLSTN2 / calsyntenin 2 / Q9ER65* / Q9H4D0*ENSGALG0000003738739


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015919  Cadherin-like
 IPR026914  Calsyntenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001558 regulation of cell growth IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007416 synapse assembly IEA
 biological_processGO:0035249 synaptic transmission, glutamatergic IEA
 biological_processGO:0050806 positive regulation of synaptic transmission IEA
 biological_processGO:0051932 synaptic transmission, GABAergic IEA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 biological_processGO:1902474 positive regulation of protein localization to synapse IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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