ENSGALG00000037387


Gallus gallus

Features
Gene ID: ENSGALG00000037387
  
Biological name :CLSTN2
  
Synonyms : calsyntenin 2 / CLSTN2
  
Possible biological names infered from orthology : Q9ER65 / Q9H4D0
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 6212445
Gene end: 6381940
  
Corresponding Affymetrix probe sets: GgaAffx.3315.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049662
Ensembl peptide - ENSGALP00000057204
NCBI entrez gene - 424819     See in Manteia.
RefSeq - XM_015277050
RefSeq - XM_015277049
swissprot - A0A1D5PW74
swissprot - A0A1D5PAA2
Ensembl - ENSGALG00000037387
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clstn2ENSDARG00000060637Danio rerio
 si:ch211-276c2.2ENSDARG00000060638Danio rerio
 CLSTN2ENSG00000158258Homo sapiens
 Clstn2ENSMUSG00000032452Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLSTN1 / calsyntenin 1 / O94985* / Q9EPL2* / Calsyntenin-1 Soluble Alc-alpha CTF1-alpha*ENSGALG0000000260659
CLSTN3 / calsyntenin 3 / Q99JH7* / Q9BQT9* / Mus musculus calsyntenin 3 (Clstn3), transcript variant 2, mRNA.*ENSGALG0000001467446


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR015919  Cadherin-like
 IPR026914  Calsyntenin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0050806 positive regulation of synaptic transmission IEA
 biological_processGO:0051965 positive regulation of synapse assembly IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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