ENSG00000171604


Homo sapiens

Features
Gene ID: ENSG00000171604
  
Biological name :CXXC5
  
Synonyms : CXXC5 / CXXC finger protein 5 / Q7LFL8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q31.2
Gene start: 139647299
Gene end: 139683882
  
Corresponding Affymetrix probe sets: 222996_s_at (Human Genome U133 Plus 2.0 Array)   224516_s_at (Human Genome U133 Plus 2.0 Array)   233955_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000421057
Ensembl peptide - ENSP00000302543
Ensembl peptide - ENSP00000421866
Ensembl peptide - ENSP00000430949
Ensembl peptide - ENSP00000430522
Ensembl peptide - ENSP00000427440
Ensembl peptide - ENSP00000427379
Ensembl peptide - ENSP00000427253
Ensembl peptide - ENSP00000427127
Ensembl peptide - ENSP00000426124
Ensembl peptide - ENSP00000425203
Ensembl peptide - ENSP00000424219
Ensembl peptide - ENSP00000423365
Ensembl peptide - ENSP00000422883
NCBI entrez gene - 51523     See in Manteia.
OMIM - 612752
RefSeq - NM_001317207
RefSeq - NM_001317199
RefSeq - NM_001317200
RefSeq - NM_001317201
RefSeq - NM_001317202
RefSeq - NM_001317203
RefSeq - NM_001317204
RefSeq - NM_001317205
RefSeq - NM_001317206
RefSeq - NM_001317208
RefSeq - NM_001317209
RefSeq - NM_001317210
RefSeq - NM_001317211
RefSeq - NM_016463
RefSeq - XM_017009573
RefSeq Peptide - NP_001304133
RefSeq Peptide - NP_001304134
RefSeq Peptide - NP_001304135
RefSeq Peptide - NP_001304136
RefSeq Peptide - NP_001304137
RefSeq Peptide - NP_001304138
RefSeq Peptide - NP_001304139
RefSeq Peptide - NP_001304140
RefSeq Peptide - NP_057547
RefSeq Peptide - NP_001304128
RefSeq Peptide - NP_001304129
RefSeq Peptide - NP_001304130
RefSeq Peptide - NP_001304131
RefSeq Peptide - NP_001304132
swissprot - E7EV55
swissprot - D6RJC1
swissprot - D6RIR8
swissprot - D6RHG9
swissprot - A0A1D5RMR5
swissprot - D6RHC6
swissprot - D6RDY2
swissprot - D6RCN9
swissprot - D6RBE0
swissprot - Q7LFL8
swissprot - D6R9V1
swissprot - D6R966
swissprot - E7EVI8
Ensembl - ENSG00000171604
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cxxc5aENSDARG00000078865Danio rerio
 cxxc5bENSDARG00000075735Danio rerio
 CXXC5ENSGALG00000000884Gallus gallus
 Cxxc5ENSMUSG00000046668Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CXXC4 / CXXC finger protein 4ENSG0000016877222
TET3 / O43151 / tet methylcytosine dioxygenase 3ENSG0000018760518
TET1 / Q8NFU7 / tet methylcytosine dioxygenase 1ENSG0000013833617
TET2 / Q6N021 / tet methylcytosine dioxygenase 2ENSG0000016876915


Protein motifs (from Interpro)
Interpro ID Name
 IPR002857  Zinc finger, CXXC-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling HMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004871 obsolete signal transducer activity HMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IDA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr